Literature DB >> 33539097

Analytical 2-Dimensional Model of Nonpolar and Ionic Solvation in Water.

Ajeet Kumar Yadav1, Pradipta Bandyopadhyay1, Tomaz Urbic2, Ken A Dill3,4,5.   

Abstract

A goal in computational chemistry is computing hydration free energies of nonpolar and charged solutes accurately, but with much greater computational speeds than in today's explicit-water simulations. Here, we take one step in that direction: a simple model of solvating waters that is analytical and thus essentially instantaneous to compute. Each water molecule is a 2-dimensional dipolar hydrogen-bonding disk that interacts around small circular solutes with different nonpolar and charge interactions. The model gives good qualitative agreement with experiments. As a function of the solute radius, it gives the solvation free energy, enthalpy and entropy as a function of temperature for the inert gas series Ne, Ar, Kr, and Xe. For anions and cations, it captures relatively well the trends versus ion radius. This approach should be readily generalizable to three dimensions.

Entities:  

Year:  2021        PMID: 33539097      PMCID: PMC7958497          DOI: 10.1021/acs.jpcb.0c10329

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  25 in total

1.  Coupling hydrophobicity, dispersion, and electrostatics in continuum solvent models.

Authors:  J Dzubiella; J M J Swanson; J A McCammon
Journal:  Phys Rev Lett       Date:  2006-03-03       Impact factor: 9.161

2.  Pressure and temperature dependence of hydrophobic hydration: volumetric, compressibility, and thermodynamic signatures.

Authors:  Maria Sabaye Moghaddam; Hue Sun Chan
Journal:  J Chem Phys       Date:  2007-03-21       Impact factor: 3.488

3.  Water's hydrogen bonds in the hydrophobic effect: a simple model.

Authors:  Huafeng Xu; Ken A Dill
Journal:  J Phys Chem B       Date:  2005-12-15       Impact factor: 2.991

4.  Theory for the solvation of nonpolar solutes in water.

Authors:  T Urbic; V Vlachy; Yu V Kalyuzhnyi; K A Dill
Journal:  J Chem Phys       Date:  2007-11-07       Impact factor: 3.488

5.  Molecular origin of the hydrophobic effect: analysis using the angle-dependent integral equation theory.

Authors:  Masahiro Kinoshita
Journal:  J Chem Phys       Date:  2008-01-14       Impact factor: 3.488

6.  Solvation theory to provide a molecular interpretation of the hydrophobic entropy loss of noble-gas hydration.

Authors:  Sheeba Jem Irudayam; Richard H Henchman
Journal:  J Phys Condens Matter       Date:  2010-06-21       Impact factor: 2.333

7.  Temperature and length scale dependence of solvophobic solvation in a single-site water-like liquid.

Authors:  John R Dowdle; Sergey V Buldyrev; H Eugene Stanley; Pablo G Debenedetti; Peter J Rossky
Journal:  J Chem Phys       Date:  2013-02-14       Impact factor: 3.488

8.  Charge density-dependent strength of hydration and biological structure.

Authors:  K D Collins
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

9.  Analytical model for three-dimensional Mercedes-Benz water molecules.

Authors:  T Urbic
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-06-25

10.  How Water's Properties Are Encoded in Its Molecular Structure and Energies.

Authors:  Emiliano Brini; Christopher J Fennell; Marivi Fernandez-Serra; Barbara Hribar-Lee; Miha Lukšič; Ken A Dill
Journal:  Chem Rev       Date:  2017-09-26       Impact factor: 60.622

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  1 in total

1.  Crustwater: Modeling Hydrophobic Solvation.

Authors:  Ajeet Kumar Yadav; Pradipta Bandyopadhyay; Evangelos A Coutsias; Ken A Dill
Journal:  J Phys Chem B       Date:  2022-08-04       Impact factor: 3.466

  1 in total

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