Literature DB >> 33519785

Evaluation and Comparison of the Efficiency of Transcription Terminators in Different Cyanobacterial Species.

Grant A R Gale1,2,3, Baojun Wang2,3, Alistair J McCormick1,2.   

Abstract

Cyanobacteria utilize sunlight to convert carbon dioxide into a wide variety of secondary metabolites and show great potential for green biotechnology applications. Although cyanobacterial synthetic biology is less mature than for other heterotrophic model organisms, there are now a range of molecular tools available to modulate and control gene expression. One area of gene regulation that still lags behind other model organisms is the modulation of gene transcription, particularly transcription termination. A vast number of intrinsic transcription terminators are now available in heterotrophs, but only a small number have been investigated in cyanobacteria. As artificial gene expression systems become larger and more complex, with short stretches of DNA harboring strong promoters and multiple gene expression cassettes, the need to stop transcription efficiently and insulate downstream regions from unwanted interference is becoming more important. In this study, we adapted a dual reporter tool for use with the CyanoGate MoClo Assembly system that can quantify and compare the efficiency of terminator sequences within and between different species. We characterized 34 intrinsic terminators in Escherichia coli, Synechocystis sp. PCC 6803, and Synechococcus elongatus UTEX 2973 and observed significant differences in termination efficiencies. However, we also identified five terminators with termination efficiencies of >96% in all three species, indicating that some terminators can behave consistently in both heterotrophic species and cyanobacteria.
Copyright © 2021 Gale, Wang and McCormick.

Entities:  

Keywords:  CyanoGate; Escherichia coli; Golden Gate; MoClo; Synechococcus elongatus UTEX 2973; Synechocystis sp. PCC 6803; intrinsic terminator; synthetic biology

Year:  2021        PMID: 33519785      PMCID: PMC7843447          DOI: 10.3389/fmicb.2020.624011

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


  70 in total

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4.  Efficient gene transfer in Synechococcus sp. strains PCC 7942 and PCC 6301 by interspecies conjugation and chromosomal recombination.

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Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

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6.  Intrinsic terminators in Mycoplasma hyopneumoniae transcription.

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Journal:  BMC Genomics       Date:  2015-04-08       Impact factor: 3.969

7.  Mobius Assembly: A versatile Golden-Gate framework towards universal DNA assembly.

Authors:  Andreas I Andreou; Naomi Nakayama
Journal:  PLoS One       Date:  2018-01-02       Impact factor: 3.240

8.  Improved lipid production via fatty acid biosynthesis and free fatty acid recycling in engineered Synechocystis sp. PCC 6803.

Authors:  Kamonchanock Eungrasamee; Rui Miao; Aran Incharoensakdi; Peter Lindblad; Saowarath Jantaro
Journal:  Biotechnol Biofuels       Date:  2019-01-04       Impact factor: 6.040

9.  The stability of an mRNA is influenced by its concentration: a potential physical mechanism to regulate gene expression.

Authors:  Sébastien Nouaille; Sophie Mondeil; Anne-Laure Finoux; Claire Moulis; Laurence Girbal; Muriel Cocaign-Bousquet
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

10.  Natural transformation of the filamentous cyanobacterium Phormidium lacuna.

Authors:  Fabian Nies; Marion Mielke; Janko Pochert; Tilman Lamparter
Journal:  PLoS One       Date:  2020-06-12       Impact factor: 3.240

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