Literature DB >> 33515602

The key role of solvent in condensation: Mapping water in liquid-liquid phase-separated FUS.

Jonas Ahlers1, Ellen M Adams1, Verian Bader2, Simone Pezzotti1, Konstanze F Winklhofer2, Jörg Tatzelt3, Martina Havenith4.   

Abstract

Formation of biomolecular condensates through liquid-liquid phase separation (LLPS) has emerged as a pervasive principle in cell biology, allowing compartmentalization and spatiotemporal regulation of dynamic cellular processes. Proteins that form condensates under physiological conditions often contain intrinsically disordered regions with low-complexity domains. Among them, the RNA-binding proteins FUS and TDP-43 have been a focus of intense investigation because aberrant condensation and aggregation of these proteins is linked to neurodegenerative diseases such as amyotrophic lateral sclerosis and frontotemporal dementia. LLPS occurs when protein-rich condensates form surrounded by a dilute aqueous solution. LLPS is per se entropically unfavorable. Energetically favorable multivalent protein-protein interactions are one important aspect to offset entropic costs. Another proposed aspect is the release of entropically unfavorable preordered hydration water into the bulk. We used attenuated total reflection spectroscopy in the terahertz frequency range to characterize the changes in the hydrogen bonding network accompanying the FUS enrichment in liquid-liquid phase-separated droplets to provide experimental evidence for the key role of the solvent as a thermodynamic driving force. The FUS concentration inside LLPS droplets was determined to be increased to 2.0 mM independent of the initial protein concentration (5 or 10 μM solutions) by fluorescence measurements. With terahertz spectroscopy, we revealed a dewetting of hydrophobic side chains in phase-separated FUS. Thus, the release of entropically unfavorable water populations into the bulk goes hand in hand with enthalpically favorable protein-protein interaction. Both changes are energetically favorable, and our study shows that both contribute to the thermodynamic driving force in phase separation.
Copyright © 2021. Published by Elsevier Inc.

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Year:  2021        PMID: 33515602      PMCID: PMC8059208          DOI: 10.1016/j.bpj.2021.01.019

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  71 in total

1.  Dry amyloid fibril assembly in a yeast prion peptide is mediated by long-lived structures containing water wires.

Authors:  Govardhan Reddy; John E Straub; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-22       Impact factor: 11.205

2.  A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.

Authors:  Avinash Patel; Hyun O Lee; Louise Jawerth; Shovamayee Maharana; Marcus Jahnel; Marco Y Hein; Stoyno Stoynov; Julia Mahamid; Shambaditya Saha; Titus M Franzmann; Andrej Pozniakovski; Ina Poser; Nicola Maghelli; Loic A Royer; Martin Weigert; Eugene W Myers; Stephan Grill; David Drechsel; Anthony A Hyman; Simon Alberti
Journal:  Cell       Date:  2015-08-27       Impact factor: 41.582

3.  Computational discovery of chemically patterned surfaces that effect unique hydration water dynamics.

Authors:  Jacob I Monroe; M Scott Shell
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-23       Impact factor: 11.205

4.  FUS Regulates Activity of MicroRNA-Mediated Gene Silencing.

Authors:  Tao Zhang; Yen-Ching Wu; Patrick Mullane; Yon Ju Ji; Honghe Liu; Lu He; Amit Arora; Ho-Yon Hwang; Amelia F Alessi; Amirhossein G Niaki; Goran Periz; Lin Guo; Hejia Wang; Elad Elkayam; Leemor Joshua-Tor; Sua Myong; John K Kim; James Shorter; Shao-En Ong; Anthony K L Leung; Jiou Wang
Journal:  Mol Cell       Date:  2018-03-01       Impact factor: 17.970

5.  FUS stimulates microRNA biogenesis by facilitating co-transcriptional Drosha recruitment.

Authors:  Mariangela Morlando; Stefano Dini Modigliani; Giulia Torrelli; Alessandro Rosa; Valerio Di Carlo; Elisa Caffarelli; Irene Bozzoni
Journal:  EMBO J       Date:  2012-12-12       Impact factor: 11.598

6.  Femtosecond Hydration Map of Intrinsically Disordered α-Synuclein.

Authors:  Shruti Arya; Avinash K Singh; Karishma Bhasne; Priyanka Dogra; Anindya Datta; Payel Das; Samrat Mukhopadhyay
Journal:  Biophys J       Date:  2018-06-05       Impact factor: 4.033

7.  Nuclear-Import Receptors Reverse Aberrant Phase Transitions of RNA-Binding Proteins with Prion-like Domains.

Authors:  Lin Guo; Hong Joo Kim; Hejia Wang; John Monaghan; Fernande Freyermuth; Julie C Sung; Kevin O'Donovan; Charlotte M Fare; Zamia Diaz; Nikita Singh; Zi Chao Zhang; Maura Coughlin; Elizabeth A Sweeny; Morgan E DeSantis; Meredith E Jackrel; Christopher B Rodell; Jason A Burdick; Oliver D King; Aaron D Gitler; Clotilde Lagier-Tourenne; Udai Bhan Pandey; Yuh Min Chook; J Paul Taylor; James Shorter
Journal:  Cell       Date:  2018-04-19       Impact factor: 41.582

8.  ALS Mutations Disrupt Phase Separation Mediated by α-Helical Structure in the TDP-43 Low-Complexity C-Terminal Domain.

Authors:  Alexander E Conicella; Gül H Zerze; Jeetain Mittal; Nicolas L Fawzi
Journal:  Structure       Date:  2016-08-18       Impact factor: 5.006

9.  Characterizing Hydration Properties Based on the Orientational Structure of Interfacial Water Molecules.

Authors:  Sucheol Shin; Adam P Willard
Journal:  J Chem Theory Comput       Date:  2018-01-02       Impact factor: 6.006

10.  Tau protein liquid-liquid phase separation can initiate tau aggregation.

Authors:  Susanne Wegmann; Bahareh Eftekharzadeh; Katharina Tepper; Katarzyna M Zoltowska; Rachel E Bennett; Simon Dujardin; Pawel R Laskowski; Danny MacKenzie; Tarun Kamath; Caitlin Commins; Charles Vanderburg; Allyson D Roe; Zhanyun Fan; Amandine M Molliex; Amayra Hernandez-Vega; Daniel Muller; Anthony A Hyman; Eckhard Mandelkow; J Paul Taylor; Bradley T Hyman
Journal:  EMBO J       Date:  2018-02-22       Impact factor: 11.598

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  6 in total

1.  A unified statistical potential reveals that amino acid stickiness governs nonspecific recruitment of client proteins into condensates.

Authors:  José A Villegas; Emmanuel D Levy
Journal:  Protein Sci       Date:  2022-07       Impact factor: 6.993

2.  Faces, facets, and functions of biomolecular condensates driven by multivalent proteins and nucleic acids.

Authors:  Jason D Kahn; Edward A Lemke; Rohit V Pappu
Journal:  Biophys J       Date:  2021-03-16       Impact factor: 4.033

3.  Cation enrichment in the ion atmosphere is promoted by local hydration of DNA.

Authors:  Chun Yu Ma; Simone Pezzotti; Gerhard Schwaab; Magdalena Gebala; Daniel Herschlag; Martina Havenith
Journal:  Phys Chem Chem Phys       Date:  2021-10-20       Impact factor: 3.945

Review 4.  Melatonin: Regulation of Prion Protein Phase Separation in Cancer Multidrug Resistance.

Authors:  Doris Loh; Russel J Reiter
Journal:  Molecules       Date:  2022-01-21       Impact factor: 4.411

Review 5.  Spatially Resolved Hydration Thermodynamics in Biomolecular Systems.

Authors:  Saumyak Mukherjee; Lars V Schäfer
Journal:  J Phys Chem B       Date:  2022-05-09       Impact factor: 3.466

6.  Spectroscopic Fingerprints of Cavity Formation and Solute Insertion as a Measure of Hydration Entropic Loss and Enthalpic Gain.

Authors:  Simone Pezzotti; Federico Sebastiani; Eliane P van Dam; Sashary Ramos; Valeria Conti Nibali; Gerhard Schwaab; Martina Havenith
Journal:  Angew Chem Int Ed Engl       Date:  2022-06-01       Impact factor: 16.823

  6 in total

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