Literature DB >> 30038028

Computational discovery of chemically patterned surfaces that effect unique hydration water dynamics.

Jacob I Monroe1, M Scott Shell2.   

Abstract

The interactions of water with solid surfaces govern their apparent hydrophobicity/hydrophilicity, influenced at the molecular scale by surface coverage of chemical groups of varied nonpolar/polar character. Recently, it has become clear that the precise patterning of surface groups, and not simply average surface coverage, has a significant impact on the structure and thermodynamics of hydration layer water, and, in turn, on macroscopic interfacial properties. Here we show that patterning also controls the dynamics of hydration water, a behavior frequently thought to be leveraged by biomolecules to influence functional dynamics, but yet to be generalized. To uncover the role of surface heterogeneities, we couple a genetic algorithm to iterative molecular dynamics simulations to design the patterning of surface functional groups, at fixed coverage, to either minimize or maximize proximal water diffusivity. Optimized surface configurations reveal that clustering of hydrophilic groups increases hydration water mobility, while dispersing them decreases it, but only if hydrophilic moieties interact with water through directional, hydrogen-bonding interactions. Remarkably, we find that, across different surfaces, coverages, and patterns, both the chemical potential for inserting a methane-sized hydrophobe near the interface and, in particular, the hydration water orientational entropy serve as strong predictors for hydration water diffusivity, suggesting that these simple thermodynamic quantities encode the way surfaces control water dynamics. These results suggest a deep and intriguing connection between hydration water thermodynamics and dynamics, demonstrating that subnanometer chemical surface patterning is an important design parameter for engineering solid-water interfaces with applications spanning separations to catalysis.

Entities:  

Keywords:  computational inverse design; hydration dynamics; interfaces; molecular dynamics simulations; water

Year:  2018        PMID: 30038028      PMCID: PMC6094118          DOI: 10.1073/pnas.1807208115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

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Journal:  Phys Rev Lett       Date:  1996-12-09       Impact factor: 9.161

2.  Mapping hydrophobicity at the nanoscale: applications to heterogeneous surfaces and proteins.

Authors:  Hari Acharya; Srivathsan Vembanur; Sumanth N Jamadagni; Shekhar Garde
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3.  To What Extent Does Surface Hydrophobicity Dictate Peptide Folding and Stability near Surfaces?

Authors:  Gül H Zerze; Ryan G Mullen; Zachary A Levine; Joan-Emma Shea; Jeetain Mittal
Journal:  Langmuir       Date:  2015-10-28       Impact factor: 3.882

4.  Coarse-grained modeling of the interface between water and heterogeneous surfaces.

Authors:  Adam P Willard; David Chandler
Journal:  Faraday Discuss       Date:  2009       Impact factor: 4.008

5.  Efficient method to characterize the context-dependent hydrophobicity of proteins.

Authors:  Amish J Patel; Shekhar Garde
Journal:  J Phys Chem B       Date:  2014-01-29       Impact factor: 2.991

6.  Characterizing hydrophobicity of interfaces by using cavity formation, solute binding, and water correlations.

Authors:  Rahul Godawat; Sumanth N Jamadagni; Shekhar Garde
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-25       Impact factor: 11.205

7.  Grid inhomogeneous solvation theory: hydration structure and thermodynamics of the miniature receptor cucurbit[7]uril.

Authors:  Crystal N Nguyen; Tom Kurtzman Young; Michael K Gilson
Journal:  J Chem Phys       Date:  2012-07-28       Impact factor: 3.488

8.  Hydrophobicity of proteins and nanostructured solutes is governed by topographical and chemical context.

Authors:  Erte Xi; Vasudevan Venkateshwaran; Lijuan Li; Nicholas Rego; Amish J Patel; Shekhar Garde
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-20       Impact factor: 11.205

9.  Probing surface tension additivity on chemically heterogeneous surfaces by a molecular approach.

Authors:  Jihang Wang; Dusan Bratko; Alenka Luzar
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-01       Impact factor: 11.205

10.  Characterizing Hydration Properties Based on the Orientational Structure of Interfacial Water Molecules.

Authors:  Sucheol Shin; Adam P Willard
Journal:  J Chem Theory Comput       Date:  2018-01-02       Impact factor: 6.006

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  7 in total

1.  Affinity of small-molecule solutes to hydrophobic, hydrophilic, and chemically patterned interfaces in aqueous solution.

Authors:  Jacob I Monroe; Sally Jiao; R Justin Davis; Dennis Robinson Brown; Lynn E Katz; M Scott Shell
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-05       Impact factor: 11.205

2.  Identifying hydrophobic protein patches to inform protein interaction interfaces.

Authors:  Nicholas B Rego; Erte Xi; Amish J Patel
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-09       Impact factor: 11.205

3.  The key role of solvent in condensation: Mapping water in liquid-liquid phase-separated FUS.

Authors:  Jonas Ahlers; Ellen M Adams; Verian Bader; Simone Pezzotti; Konstanze F Winklhofer; Jörg Tatzelt; Martina Havenith
Journal:  Biophys J       Date:  2021-01-28       Impact factor: 4.033

4.  Exploring the Hydration Water Character on Atomically Dislocated Surfaces by Surface Enhanced Raman Spectroscopy.

Authors:  Dongha Shin; Hoyoung Seo; Wonho Jhe
Journal:  ACS Cent Sci       Date:  2020-09-30       Impact factor: 14.553

5.  Spectroscopic Fingerprints of Cavity Formation and Solute Insertion as a Measure of Hydration Entropic Loss and Enthalpic Gain.

Authors:  Simone Pezzotti; Federico Sebastiani; Eliane P van Dam; Sashary Ramos; Valeria Conti Nibali; Gerhard Schwaab; Martina Havenith
Journal:  Angew Chem Int Ed Engl       Date:  2022-06-01       Impact factor: 16.823

6.  Local Mutations Can Serve as a Game Changer for Global Protein Solvent Interaction.

Authors:  Ellen M Adams; Simone Pezzotti; Jonas Ahlers; Maximilian Rüttermann; Maxim Levin; Adi Goldenzweig; Yoav Peleg; Sarel J Fleishman; Irit Sagi; Martina Havenith
Journal:  JACS Au       Date:  2021-06-18

7.  Molecular Fingerprints of Hydrophobicity at Aqueous Interfaces from Theory and Vibrational Spectroscopies.

Authors:  Simone Pezzotti; Alessandra Serva; Federico Sebastiani; Flavio Siro Brigiano; Daria Ruth Galimberti; Louis Potier; Serena Alfarano; Gerhard Schwaab; Martina Havenith; Marie-Pierre Gaigeot
Journal:  J Phys Chem Lett       Date:  2021-04-14       Impact factor: 6.475

  7 in total

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