Literature DB >> 33509106

Joint optic disc and cup segmentation based on densely connected depthwise separable convolution deep network.

Bingyan Liu1, Daru Pan2, Hui Song1.   

Abstract

BACKGROUND: Glaucoma is an eye disease that causes vision loss and even blindness. The cup to disc ratio (CDR) is an important indicator for glaucoma screening and diagnosis. Accurate segmentation for the optic disc and cup helps obtain CDR. Although many deep learning-based methods have been proposed to segment the disc and cup for fundus image, achieving highly accurate segmentation performance is still a great challenge due to the heavy overlap between the optic disc and cup.
METHODS: In this paper, we propose a two-stage method where the optic disc is firstly located and then the optic disc and cup are segmented jointly according to the interesting areas. Also, we consider the joint optic disc and cup segmentation task as a multi-category semantic segmentation task for which a deep learning-based model named DDSC-Net (densely connected depthwise separable convolution network) is proposed. Specifically, we employ depthwise separable convolutional layer and image pyramid input to form a deeper and wider network to improve segmentation performance. Finally, we evaluate our method on two publicly available datasets, Drishti-GS and REFUGE dataset.
RESULTS: The experiment results show that the proposed method outperforms state-of-the-art methods, such as pOSAL, GL-Net, M-Net and Stack-U-Net in terms of disc coefficients, with the scores of 0.9780 (optic disc) and 0.9123 (optic cup) on the DRISHTI-GS dataset, and the scores of 0.9601 (optic disc) and 0.8903 (optic cup) on the REFUGE dataset. Particularly, in the more challenging optic cup segmentation task, our method outperforms GL-Net by 0.7[Formula: see text] in terms of disc coefficients on the Drishti-GS dataset and outperforms pOSAL by 0.79[Formula: see text] on the REFUGE dataset, respectively.
CONCLUSIONS: The promising segmentation performances reveal that our method has the potential in assisting the screening and diagnosis of glaucoma.

Entities:  

Keywords:  Deep learining; Densely connected; Depthwise separable convolution; Optic cup segmentation; Optic disc segmentation

Mesh:

Year:  2021        PMID: 33509106      PMCID: PMC7842021          DOI: 10.1186/s12880-020-00528-6

Source DB:  PubMed          Journal:  BMC Med Imaging        ISSN: 1471-2342            Impact factor:   1.930


  14 in total

1.  Detecting the optic disc boundary in digital fundus images using morphological, edge detection, and feature extraction techniques.

Authors:  Arturo Aquino; Manuel Emilio Gegundez-Arias; Diego Marin
Journal:  IEEE Trans Med Imaging       Date:  2010-06-17       Impact factor: 10.048

2.  Optic disc segmentation using the sliding band filter.

Authors:  Behdad Dashtbozorg; Ana Maria Mendonça; Aurélio Campilho
Journal:  Comput Biol Med       Date:  2014-10-30       Impact factor: 4.589

3.  Joint optic disc and cup boundary extraction from monocular fundus images.

Authors:  Arunava Chakravarty; Jayanthi Sivaswamy
Journal:  Comput Methods Programs Biomed       Date:  2017-06-23       Impact factor: 5.428

4.  Glaucoma detection using entropy sampling and ensemble learning for automatic optic cup and disc segmentation.

Authors:  Julian Zilly; Joachim M Buhmann; Dwarikanath Mahapatra
Journal:  Comput Med Imaging Graph       Date:  2016-08-23       Impact factor: 4.790

5.  WGAN domain adaptation for the joint optic disc-and-cup segmentation in fundus images.

Authors:  Shreya Kadambi; Zeya Wang; Eric Xing
Journal:  Int J Comput Assist Radiol Surg       Date:  2020-05-22       Impact factor: 2.924

6.  REFUGE Challenge: A unified framework for evaluating automated methods for glaucoma assessment from fundus photographs.

Authors:  José Ignacio Orlando; Huazhu Fu; João Barbosa Breda; Karel van Keer; Deepti R Bathula; Andrés Diaz-Pinto; Ruogu Fang; Pheng-Ann Heng; Jeyoung Kim; JoonHo Lee; Joonseok Lee; Xiaoxiao Li; Peng Liu; Shuai Lu; Balamurali Murugesan; Valery Naranjo; Sai Samarth R Phaye; Sharath M Shankaranarayana; Apoorva Sikka; Jaemin Son; Anton van den Hengel; Shujun Wang; Junyan Wu; Zifeng Wu; Guanghui Xu; Yongli Xu; Pengshuai Yin; Fei Li; Xiulan Zhang; Yanwu Xu; Hrvoje Bogunović
Journal:  Med Image Anal       Date:  2019-10-08       Impact factor: 8.545

7.  Patch-Based Output Space Adversarial Learning for Joint Optic Disc and Cup Segmentation.

Authors:  Shujun Wang; Lequan Yu; Xin Yang; Chi-Wing Fu; Pheng-Ann Heng
Journal:  IEEE Trans Med Imaging       Date:  2019-02-18       Impact factor: 10.048

8.  Optic disc and cup segmentation from color fundus photograph using graph cut with priors.

Authors:  Yuanjie Zheng; Dwight Stambolian; Joan O'Brien; James C Gee
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

9.  The number of people with glaucoma worldwide in 2010 and 2020.

Authors:  H A Quigley; A T Broman
Journal:  Br J Ophthalmol       Date:  2006-03       Impact factor: 4.638

10.  Joint Optic Disc and Cup Segmentation Based on Multi-Label Deep Network and Polar Transformation.

Authors:  Huazhu Fu; Jun Cheng; Yanwu Xu; Damon Wing Kee Wong; Jiang Liu; Xiaochun Cao
Journal:  IEEE Trans Med Imaging       Date:  2018-07       Impact factor: 10.048

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  2 in total

Review 1.  Machine Learning and Deep Learning Techniques for Optic Disc and Cup Segmentation - A Review.

Authors:  Mohammed Alawad; Abdulrhman Aljouie; Suhailah Alamri; Mansour Alghamdi; Balsam Alabdulkader; Norah Alkanhal; Ahmed Almazroa
Journal:  Clin Ophthalmol       Date:  2022-03-11

2.  AFENet: Attention Fusion Enhancement Network for Optic Disc Segmentation of Premature Infants.

Authors:  Yuanyuan Peng; Weifang Zhu; Zhongyue Chen; Fei Shi; Meng Wang; Yi Zhou; Lianyu Wang; Yuhe Shen; Daoman Xiang; Feng Chen; Xinjian Chen
Journal:  Front Neurosci       Date:  2022-04-19       Impact factor: 5.152

  2 in total

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