Literature DB >> 33500558

Parental nucleosome segregation and the inheritance of cellular identity.

Thelma M Escobar1,2, Alejandra Loyola3,4, Danny Reinberg5,6.   

Abstract

Gene expression programmes conferring cellular identity are achieved through the organization of chromatin structures that either facilitate or impede transcription. Among the key determinants of chromatin organization are the histone modifications that correlate with a given transcriptional status and chromatin state. Until recently, the details for the segregation of nucleosomes on DNA replication and their implications in re-establishing heritable chromatin domains remained unclear. Here, we review recent findings detailing the local segregation of parental nucleosomes and highlight important advances as to how histone methyltransferases associated with the establishment of repressive chromatin domains facilitate epigenetic inheritance.

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Year:  2021        PMID: 33500558      PMCID: PMC8609916          DOI: 10.1038/s41576-020-00312-w

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  155 in total

1.  The RCAF complex mediates chromatin assembly during DNA replication and repair.

Authors:  J K Tyler; C R Adams; S R Chen; R Kobayashi; R T Kamakaka; J T Kadonaga
Journal:  Nature       Date:  1999-12-02       Impact factor: 49.962

2.  Epigenetics. Restricted epigenetic inheritance of H3K9 methylation.

Authors:  Pauline N C B Audergon; Sandra Catania; Alexander Kagansky; Pin Tong; Manu Shukla; Alison L Pidoux; Robin C Allshire
Journal:  Science       Date:  2015-04-03       Impact factor: 47.728

Review 3.  Facultative heterochromatin: is there a distinctive molecular signature?

Authors:  Patrick Trojer; Danny Reinberg
Journal:  Mol Cell       Date:  2007-10-12       Impact factor: 17.970

4.  USF1 recruits histone modification complexes and is critical for maintenance of a chromatin barrier.

Authors:  Suming Huang; Xingguo Li; Timur M Yusufzai; Yi Qiu; Gary Felsenfeld
Journal:  Mol Cell Biol       Date:  2007-09-10       Impact factor: 4.272

5.  Histone modification: cause or cog?

Authors:  Steven Henikoff; Ali Shilatifard
Journal:  Trends Genet       Date:  2011-07-20       Impact factor: 11.639

Review 6.  The Effects of Replication Stress on S Phase Histone Management and Epigenetic Memory.

Authors:  Saša Šviković; Julian E Sale
Journal:  J Mol Biol       Date:  2016-11-19       Impact factor: 5.469

7.  Causal role for inheritance of H3K27me3 in maintaining the OFF state of a Drosophila HOX gene.

Authors:  Rory T Coleman; Gary Struhl
Journal:  Science       Date:  2017-03-16       Impact factor: 47.728

Review 8.  Assembling chromatin: the long and winding road.

Authors:  Anthony T Annunziato
Journal:  Biochim Biophys Acta       Date:  2013 Mar-Apr

Review 9.  DNA replication timing, genome stability and cancer: late and/or delayed DNA replication timing is associated with increased genomic instability.

Authors:  Nathan Donley; Mathew J Thayer
Journal:  Semin Cancer Biol       Date:  2013-01-14       Impact factor: 15.707

Review 10.  Advances in fluorescence labeling strategies for dynamic cellular imaging.

Authors:  Kevin M Dean; Amy E Palmer
Journal:  Nat Chem Biol       Date:  2014-07       Impact factor: 15.040

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  16 in total

1.  NRF1 association with AUTS2-Polycomb mediates specific gene activation in the brain.

Authors:  Sanxiong Liu; Kimberly A Aldinger; Chi Vicky Cheng; Takae Kiyama; Mitali Dave; Hanna K McNamara; Wukui Zhao; James M Stafford; Nicolas Descostes; Pedro Lee; Stefano G Caraffi; Ivan Ivanovski; Edoardo Errichiello; Christiane Zweier; Orsetta Zuffardi; Michael Schneider; Antigone S Papavasiliou; M Scott Perry; Jennifer Humberson; Megan T Cho; Astrid Weber; Andrew Swale; Tudor C Badea; Chai-An Mao; Livia Garavelli; William B Dobyns; Danny Reinberg
Journal:  Mol Cell       Date:  2021-10-11       Impact factor: 17.970

2.  Environmentally induced DNA methylation is inherited across generations in an aquatic keystone species.

Authors:  Nathalie Feiner; Reinder Radersma; Louella Vasquez; Markus Ringnér; Björn Nystedt; Amanda Raine; Elmar W Tobi; Bastiaan T Heijmans; Tobias Uller
Journal:  iScience       Date:  2022-04-25

Review 3.  DDK: The Outsourced Kinase of Chromosome Maintenance.

Authors:  Peter J Gillespie; J Julian Blow
Journal:  Biology (Basel)       Date:  2022-06-07

Review 4.  Leaving histone unturned for epigenetic inheritance.

Authors:  Chun-Min Shan; Yimeng Fang; Songtao Jia
Journal:  FEBS J       Date:  2021-11-02       Impact factor: 5.622

Review 5.  The molecular principles of gene regulation by Polycomb repressive complexes.

Authors:  Neil P Blackledge; Robert J Klose
Journal:  Nat Rev Mol Cell Biol       Date:  2021-08-16       Impact factor: 94.444

Review 6.  Epigenome plasticity in plants.

Authors:  James P B Lloyd; Ryan Lister
Journal:  Nat Rev Genet       Date:  2021-09-15       Impact factor: 53.242

7.  Epigenetic regulation of nuclear lamina-associated heterochromatin by HAT1 and the acetylation of newly synthesized histones.

Authors:  Liudmila V Popova; Prabakaran Nagarajan; Callie M Lovejoy; Benjamin D Sunkel; Miranda L Gardner; Meng Wang; Michael A Freitas; Benjamin Z Stanton; Mark R Parthun
Journal:  Nucleic Acids Res       Date:  2021-12-02       Impact factor: 16.971

8.  Chaperone mediated autophagy contributes to the newly synthesized histones H3 and H4 quality control.

Authors:  Juan Hormazabal; Francisco Saavedra; Claudia Espinoza-Arratia; Nicolas W Martinez; Tatiana Cruces; Iván E Alfaro; Alejandra Loyola
Journal:  Nucleic Acids Res       Date:  2022-02-28       Impact factor: 16.971

9.  Stable inheritance of H3.3-containing nucleosomes during mitotic cell divisions.

Authors:  Xiaowei Xu; Shoufu Duan; Xu Hua; Zhiming Li; Richard He; Zhiguo Zhang
Journal:  Nat Commun       Date:  2022-05-06       Impact factor: 17.694

10.  Hybrid protein assembly-histone modification mechanism for PRC2-based epigenetic switching and memory.

Authors:  Cecilia Lövkvist; Pawel Mikulski; Svenja Reeck; Matthew Hartley; Caroline Dean; Martin Howard
Journal:  Elife       Date:  2021-09-02       Impact factor: 8.140

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