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Literature DB >> 33490489

The complete chloroplast genome of Plagiorhegma dubia Maxim., a traditional Chinese medicinal herb.

Caihong Wang^1,2, Ying Wang³, Qiong Liang², Tae-Jin Yang⁴, Zhilin Li¹, Yanjun Zhang^2,3.

Abstract

Plagiorhegma dubia Maxim. is a traditional Chinese medicinal herb from Plagiorhegma, Berberidaceae, which is distributed in the northeast of China, Korea, Russia. The complete chloroplast genome is 152,468 bp in length, with large single copy (LSC 82,257 bp) and small single copy (SSC 16,599 bp) regions separated by a pair of inverted repeats (IR 26 805 bp). The genome has a total of 113 genes including 79 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis shows that P. dubia is closely related with Sinopodophyllum hexandrum and Epimedium species. The results are of great implication for the development and utilization of P. dubia and the phylogenetic researches on Berberidaceae.

Entities: Chemical Species

Keywords: Chloroplast; Plagiorhegma dubia; genome sequence; medicinal herb

Year: 2018 PMID： 33490489 PMCID： PMC7800371 DOI： 10.1080/23802359.2018.1424586

Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN： 2380-2359 Impact factor: 0.658

13 in total

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Authors: Lihua Meng; Ruijuan Liu; Jianbing Chen; Chenxu Ding
Journal: Mitochondrial DNA A DNA Mapp Seq Anal Date: 2015-12-29 Impact factor: 1.514

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Authors: Kyunghee Kim; Sang-Choon Lee; Junki Lee; Hyun Oh Lee; Ho Jun Joh; Nam-Hoon Kim; Hyun-Seung Park; Tae-Jin Yang
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10. The Complete Chloroplast Genome Sequences of Five Epimedium Species: Lights into Phylogenetic and Taxonomic Analyses.

Authors: Yanjun Zhang; Liuwen Du; Ao Liu; Jianjun Chen; Li Wu; Weiming Hu; Wei Zhang; Kyunghee Kim; Sang-Choon Lee; Tae-Jin Yang; Ying Wang
Journal: Front Plant Sci Date: 2016-03-15 Impact factor: 5.753