Literature DB >> 33479289

Recording site placement on planar silicon-based probes affects signal quality in acute neuronal recordings.

Richárd Fiáth1,2, Domokos Meszéna3,4, Zoltán Somogyvári5, Mihály Boda4, Péter Barthó3, Patrick Ruther6,7, István Ulbert3,4.   

Abstract

Multisite, silicon-based probes are widely used tools to record the electrical activity of neuronal populations. Several physical features of these devices are designed to improve their recording performance. Here, our goal was to investigate whether the position of recording sites on the silicon shank might affect the quality of the recorded neural signal in acute experiments. Neural recordings obtained with five different types of high-density, single-shank, planar silicon probes from anesthetized rats were analyzed. Wideband data were filtered to extract spiking activity, then the amplitude distribution of samples and quantitative properties of the recorded brain activity (single unit yield, spike amplitude and isolation distance) were compared between sites located at different positions of the silicon shank, focusing particularly on edge and center sites. Edge sites outperformed center sites: for all five probe types there was a significant difference in the signal power computed from the amplitude distributions, and edge sites recorded significantly more large amplitude samples both in the positive and negative range. Although the single unit yield was similar between site positions, the difference in spike amplitudes was noticeable in the range corresponding to high-amplitude spikes. Furthermore, the advantage of edge sites slightly decreased with decreasing shank width. Our results might aid the design of novel neural implants in enhancing their recording performance by identifying more efficient recording site placements.

Entities:  

Year:  2021        PMID: 33479289      PMCID: PMC7819990          DOI: 10.1038/s41598-021-81127-5

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  60 in total

Review 1.  Large-scale recording of neuronal ensembles.

Authors:  György Buzsáki
Journal:  Nat Neurosci       Date:  2004-05       Impact factor: 24.884

2.  Factors influencing the biocompatibility of insertable silicon microshafts in cerebral cortex.

Authors:  D J Edell; V V Toi; V M McNeil; L D Clark
Journal:  IEEE Trans Biomed Eng       Date:  1992-06       Impact factor: 4.538

3.  Effects of insertion conditions on tissue strain and vascular damage during neuroprosthetic device insertion.

Authors:  C S Bjornsson; S J Oh; Y A Al-Kofahi; Y J Lim; K L Smith; J N Turner; S De; B Roysam; W Shain; S J Kim
Journal:  J Neural Eng       Date:  2006-06-21       Impact factor: 5.379

4.  On the origin of the extracellular action potential waveform: A modeling study.

Authors:  Carl Gold; Darrell A Henze; Christof Koch; György Buzsáki
Journal:  J Neurophysiol       Date:  2006-02-08       Impact factor: 2.714

5.  Effect of insertion speed on tissue response and insertion mechanics of a chronically implanted silicon-based neural probe.

Authors:  M Welkenhuysen; A Andrei; L Ameye; W Eberle; B Nuttin
Journal:  IEEE Trans Biomed Eng       Date:  2011-09-01       Impact factor: 4.538

6.  A silicon-based microelectrode array with a microdrive for monitoring brainstem regions of freely moving rats.

Authors:  G Márton; P Baracskay; B Cseri; B Plósz; G Juhász; Z Fekete; A Pongrácz
Journal:  J Neural Eng       Date:  2016-02-29       Impact factor: 5.379

Review 7.  Improving data quality in neuronal population recordings.

Authors:  Kenneth D Harris; Rodrigo Quian Quiroga; Jeremy Freeman; Spencer L Smith
Journal:  Nat Neurosci       Date:  2016-08-26       Impact factor: 24.884

Review 8.  Challenges and opportunities for large-scale electrophysiology with Neuropixels probes.

Authors:  Nicholas A Steinmetz; Christof Koch; Kenneth D Harris; Matteo Carandini
Journal:  Curr Opin Neurobiol       Date:  2018-02-13       Impact factor: 6.627

9.  Chronically implanted Neuropixels probes enable high-yield recordings in freely moving mice.

Authors:  Ashley L Juavinett; George Bekheet; Anne K Churchland
Journal:  Elife       Date:  2019-08-14       Impact factor: 8.140

10.  Single-trial neural dynamics are dominated by richly varied movements.

Authors:  Simon Musall; Matthew T Kaufman; Ashley L Juavinett; Steven Gluf; Anne K Churchland
Journal:  Nat Neurosci       Date:  2019-09-24       Impact factor: 24.884

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  4 in total

Review 1.  From End to End: Gaining, Sorting, and Employing High-Density Neural Single Unit Recordings.

Authors:  Réka Barbara Bod; János Rokai; Domokos Meszéna; Richárd Fiáth; István Ulbert; Gergely Márton
Journal:  Front Neuroinform       Date:  2022-06-13       Impact factor: 3.739

2.  Assessing the Feasibility of Developing in vivo Neuroprobes for Parallel Intracellular Recording and Stimulation: A Perspective.

Authors:  Micha E Spira; Hadas Erez; Aviv Sharon
Journal:  Front Neurosci       Date:  2022-01-25       Impact factor: 4.677

Review 3.  Engineering strategies towards overcoming bleeding and glial scar formation around neural probes.

Authors:  Elisabeth Otte; Andreas Vlachos; Maria Asplund
Journal:  Cell Tissue Res       Date:  2022-01-14       Impact factor: 5.249

4.  Dataset of cortical activity recorded with high spatial resolution from anesthetized rats.

Authors:  Csaba Horváth; Lili Fanni Tóth; István Ulbert; Richárd Fiáth
Journal:  Sci Data       Date:  2021-07-15       Impact factor: 6.444

  4 in total

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