Literature DB >> 33478071

Satellite DNA in Neotropical Deer Species.

Miluse Vozdova1, Svatava Kubickova1, Natália Martínková2, David Javier Galindo3, Agda Maria Bernegossi3, Halina Cernohorska1, Dita Kadlcikova1, Petra Musilová1, Jose Mauricio Duarte3, Jiri Rubes1.   

Abstract

The taxonomy and phylogenetics of Neotropical deer have been mostly based on morphological criteria and needs a critical revision on the basis of new molecular and cytogenetic markers. In this study, we used the variation in the sequence, copy number, and chromosome localization of satellite I-IV DNA to evaluate evolutionary relationships among eight Neotropical deer species. Using FISH with satI-IV probes derived from Mazama gouazoubira, we proved the presence of satellite DNA blocks in peri/centromeric regions of all analyzed deer. Satellite DNA was also detected in the interstitial chromosome regions of species of the genus Mazama with highly reduced chromosome numbers. In contrast to Blastocerus dichotomus, Ozotoceros bezoarticus, and Odocoileus virginianus, Mazama species showed high abundance of satIV DNA by FISH. The phylogenetic analysis of the satellite DNA showed close relationships between O. bezoarticus and B. dichotomus. Furthermore, the Neotropical and Nearctic populations of O. virginianus formed a single clade. However, the satellite DNA phylogeny did not allow resolving the relationships within the genus Mazama. The high abundance of the satellite DNA in centromeres probably contributes to the formation of chromosomal rearrangements, thus leading to a fast and ongoing speciation in this genus, which has not yet been reflected in the satellite DNA sequence diversification.

Entities:  

Keywords:  Cervidae; FISH; comparative cytogenetics; satellite DNA; sequencing

Mesh:

Substances:

Year:  2021        PMID: 33478071      PMCID: PMC7835801          DOI: 10.3390/genes12010123

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  77 in total

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Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

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Journal:  Biosystems       Date:  1990       Impact factor: 1.973

5.  CENP-A associated complex satellite DNA in the kinetochore of the Indian muntjac.

Authors:  O Vafa; R D Shelby; K F Sullivan
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6.  Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits.

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Journal:  Science       Date:  2019-06-21       Impact factor: 47.728

Review 7.  Satellite DNAs between selfishness and functionality: structure, genomics and evolution of tandem repeats in centromeric (hetero)chromatin.

Authors:  Miroslav Plohl; Andrea Luchetti; Nevenka Mestrović; Barbara Mantovani
Journal:  Gene       Date:  2007-12-04       Impact factor: 3.688

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Authors:  A Płucienniczak; J Skowroński; J Jaworski
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9.  Characterisation, phenotypic manifestations and X-inactivation pattern in 14 patients with X-autosome translocations.

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10.  Contrasting origin of B chromosomes in two cervids (Siberian roe deer and grey brocket deer) unravelled by chromosome-specific DNA sequencing.

Authors:  Alexey I Makunin; Ilya G Kichigin; Denis M Larkin; Patricia C M O'Brien; Malcolm A Ferguson-Smith; Fengtang Yang; Anastasiya A Proskuryakova; Nadezhda V Vorobieva; Ekaterina N Chernyaeva; Stephen J O'Brien; Alexander S Graphodatsky; Vladimir A Trifonov
Journal:  BMC Genomics       Date:  2016-08-11       Impact factor: 3.969

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  1 in total

1.  Revalidation of Mazama rufa (Illiger 1815) (Artiodactyla: Cervidae) as a Distinct Species out of the Complex Mazama americana (Erxleben 1777).

Authors:  Pedro H F Peres; Douglas J Luduvério; Agda Maria Bernegossi; David J Galindo; Guilherme B Nascimento; Márcio L Oliveira; Eluzai Dinai Pinto Sandoval; Miluse Vozdova; Svatava Kubickova; Halina Cernohorska; José Maurício Barbanti Duarte
Journal:  Front Genet       Date:  2021-12-14       Impact factor: 4.599

  1 in total

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