Literature DB >> 10328625

Pericentric satellite DNA and molecular phylogeny in Acomys (Rodentia).

B Kunze1, W Traut, S Garagna, D Weichenhan, C A Redi, H Winking.   

Abstract

Satellite DNAs (stDNAs) of four Acomys species (spiny-mice), A. cahirinus, A. cineraceus, A. dimidiatus and A. russatus, belong to closely related sequence families. Monomer sizes range from 338 to 364 bp. Between-species sequence identity was from 81.0% to 97.2%. The molecular phylogeny of the sequences helps to clarify the taxonomy of this 'difficult' group. The A. dimidiatus genome contains about 60000 repeats. According to the restriction patterns, repeats are arranged in tandem. The stDNA maps to the centromeric heterochromatin of most autosomes, both acrocentric and metacentric, but appears to be absent in the centromeric region of Y chromosomes. A well-conserved centromere protein B (CENP-B) box is present in the stDNA of A. russatus while it is degenerated in the other species.

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Year:  1999        PMID： 10328625     DOI： 10.1023/a:1009251202340

Source DB:  PubMed          Journal:  Chromosome Res        ISSN： 0967-3849            Impact factor:   5.239


  27 in total

1.  GenBank.

Authors:  D A Benson; M S Boguski; D J Lipman; J Ostell; B F Ouellette
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

2.  Satellite 1 DNA sequence from genomic DNA of the giant panda Ailuropoda melanoleuca.

Authors:  Z A Wu; W X Liu; C Murphy; J Gall
Journal:  Nucleic Acids Res       Date:  1990-02-25       Impact factor: 16.971

3.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

Review 4.  Functional aspects of satellite DNA and heterochromatin.

Authors:  B John; G L Miklos
Journal:  Int Rev Cytol       Date:  1979

Review 5.  Highly repeated sequences in mammalian genomes.

Authors:  M F Singer
Journal:  Int Rev Cytol       Date:  1982

6.  Interspersed centromeric element with a CENP-B box-like motif in Chironomus pallidivittatus.

Authors:  C C López; J E Edström
Journal:  Nucleic Acids Res       Date:  1998-09-15       Impact factor: 16.971

7.  Centromeres, CENP-B and Tigger too.

Authors:  D Kipling; P E Warburton
Journal:  Trends Genet       Date:  1997-04       Impact factor: 11.639

8.  A member of the mouse LRR transcript family with homology to the human Sp100 gene.

Authors:  C Plass; D Weichenhan; B Kunze; T Hellwig; C Schneider; F A Bautz; K H Grzeschik; W Traut; H Winking
Journal:  Hereditas       Date:  1995       Impact factor: 3.271

9.  Differences in the organization and chromosomal allocation of satellite DNA between the European long tailed house mice Mus domesticus and Mus musculus.

Authors:  C A Redi; S Garagna; G Della Valle; G Bottiroli; P Dell'Orto; G Viale; F A Peverali; E Raimondi; J Forejt
Journal:  Chromosoma       Date:  1990-04       Impact factor: 4.316

10.  Presence and abundance of CENP-B box sequences in great ape subsets of primate-specific alpha-satellite DNA.

Authors:  T Haaf; A G Mater; J Wienberg; D C Ward
Journal:  J Mol Evol       Date:  1995-10       Impact factor: 2.395
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  2 in total

1.  Evolution of the structure and composition of house mouse satellite DNA sequences in the subgenus Mus (Rodentia: Muridea): a cytogenomic approach.

Authors:  B Cazaux; J Catalan; F Justy; C Escudé; E Desmarais; J Britton-Davidian
Journal:  Chromosoma       Date:  2013-03-21       Impact factor: 4.316

2.  Satellite DNA in Neotropical Deer Species.

Authors:  Miluse Vozdova; Svatava Kubickova; Natália Martínková; David Javier Galindo; Agda Maria Bernegossi; Halina Cernohorska; Dita Kadlcikova; Petra Musilová; Jose Mauricio Duarte; Jiri Rubes
Journal:  Genes (Basel)       Date:  2021-01-19       Impact factor: 4.096
  2 in total

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