Literature DB >> 33477773

Density Functional Theory (DFT)-Aided Structure Elucidation of Linear Diterpenes from the Irish Brown Seaweed Bifurcaria bifurcata.

Vangelis Smyrniotopoulos1, Daria Firsova1, Howard Fearnhead2, Laura Grauso3, Alfonso Mangoni4, Deniz Tasdemir1,5,6.   

Abstract

Brown alga Bifurcaria bifurcata is an extraordinarily rich source of linear (acylic) diterpenes with enormous structural diversity. As part of our interest into secondary metabolites of the Irish seaweeds, here we report four new acyclic diterpenes (1-4) and seven known terpenoids (5-11) from the CHCl3 extract of B. bifurcata. The planar structures of the new metabolites were elucidated by means of 1D and 2D NMR, HRMS, and FT-IR spectroscopy. Since linear diterpenes are highly flexible compounds, the assignment of their stereochemistry by conventional methods, e.g., NOESY NMR, is difficult. Therefore, we employed extensive quantum-mechanical prediction of NMR chemical shifts and optical rotation analyses to identify the relative and absolute configurations of the new compounds 1-4. Several compounds moderately inhibited the human breast cancer cell line (MDA-MB-231) with IC50 values ranging from 10.0 to 33.5 μg/mL. This study not only demonstrates the vast capacity of the Irish B. bifurcata to produce highly oxygenated linear diterpenoids, but also highlights the potential of new methodologies for assignment of their stereogenic centers.

Entities:  

Keywords:  Bifurcaria bifurcata; DFT; anticancer activity; brown alga; linear diterpene; seaweed

Mesh:

Substances:

Year:  2021        PMID: 33477773      PMCID: PMC7832306          DOI: 10.3390/md19010042

Source DB:  PubMed          Journal:  Mar Drugs        ISSN: 1660-3397            Impact factor:   5.118


  21 in total

1.  Assignment of absolute configurations of highly flexible linear diterpenes from the brown alga Bifurcaria bifurcata by VCD spectroscopy.

Authors:  Christian Merten; Vangelis Smyrniotopoulos; Deniz Tasdemir
Journal:  Chem Commun (Camb)       Date:  2015-11-21       Impact factor: 6.222

2.  Beyond DP4: an Improved Probability for the Stereochemical Assignment of Isomeric Compounds using Quantum Chemical Calculations of NMR Shifts.

Authors:  Nicolás Grimblat; María M Zanardi; Ariel M Sarotti
Journal:  J Org Chem       Date:  2015-12-10       Impact factor: 4.354

Review 3.  Computational prediction of chiroptical properties in structure elucidation of natural products.

Authors:  Laura Grauso; Roberta Teta; Germana Esposito; Marialuisa Menna; Alfonso Mangoni
Journal:  Nat Prod Rep       Date:  2019-06-05       Impact factor: 13.423

Review 4.  Algal metabolites: An inevitable substitute for antibiotics.

Authors:  Sukanya Bhowmick; Aninda Mazumdar; Amitava Moulick; Vojtech Adam
Journal:  Biotechnol Adv       Date:  2020-06-05       Impact factor: 14.227

Review 5.  Computational prediction of 1H and 13C chemical shifts: a useful tool for natural product, mechanistic, and synthetic organic chemistry.

Authors:  Michael W Lodewyk; Matthew R Siebert; Dean J Tantillo
Journal:  Chem Rev       Date:  2011-11-17       Impact factor: 60.622

6.  Geranylgeraniol-type diterpenoids, boletinins A-J, from Boletinus cavipes as inhibitors of superoxide anion generation in macrophage cells.

Authors:  Tsunashi Kamo; Kazuya Sato; Kikuo Sen; Hisao Shibata; Mitsuru Hirota
Journal:  J Nat Prod       Date:  2004-06       Impact factor: 4.050

7.  (S)-13-hydroxygeranylgeraniol-derived furanoditerpenes from Bifurcaria bifurcata.

Authors:  R Valls; L Piovetti; B Banaigs; A Archavlis; M Pellegrini
Journal:  Phytochemistry       Date:  1995-05       Impact factor: 4.072

Review 8.  Current Research on the Bioprospection of Linear Diterpenes from Bifurcaria bifurcata: From Extraction Methodologies to Possible Applications.

Authors:  Adriana C S Pais; Jorge A Saraiva; Sílvia M Rocha; Armando J D Silvestre; Sónia A O Santos
Journal:  Mar Drugs       Date:  2019-09-28       Impact factor: 5.118

9.  Oxygenated Acyclic Diterpenes with Anticancer Activity from the Irish Brown Seaweed Bifurcaria bifurcata.

Authors:  Vangelis Smyrniotopoulos; Christian Merten; Daria Firsova; Howard Fearnhead; Deniz Tasdemir
Journal:  Mar Drugs       Date:  2020-11-23       Impact factor: 5.118

10.  Bifurcatriol, a New Antiprotozoal Acyclic Diterpene from the Brown Alga Bifurcaria bifurcata.

Authors:  Vangelis Smyrniotopoulos; Christian Merten; Marcel Kaiser; Deniz Tasdemir
Journal:  Mar Drugs       Date:  2017-08-02       Impact factor: 5.118

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  1 in total

1.  New Polyenes from the Marine-Derived Fungus Talaromyces cyanescens with Anti-Neuroinflammatory and Cytotoxic Activities.

Authors:  Hee Jae Shin; Cao Van Anh; Duk-Yeon Cho; Dong-Kug Choi; Jong Soon Kang; Phan Thi Hoai Trinh; Byeoung-Kyu Choi; Hwa-Sun Lee
Journal:  Molecules       Date:  2021-02-05       Impact factor: 4.411

  1 in total

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