Literature DB >> 31166350

Computational prediction of chiroptical properties in structure elucidation of natural products.

Laura Grauso1, Roberta Teta2, Germana Esposito2, Marialuisa Menna2, Alfonso Mangoni2.   

Abstract

Covering: up to 2019This review covers the current status of the quantum mechanical prediction of chiroptical properties, such as electronic CD and optical rotation, as needed for stereochemical assignments in new natural products. The reliability of the prediction of chiroptical properties is steadily increasing, with a parallel decrease in the required computational resources. Now, quantum mechanical calculations for a medium-sized natural product can be reliably performed by natural product chemists on a mainstream PC. This review is aimed to guide natural product chemists through the numerous steps involved in such calculations. Through a concise, but comprehensive, discussion of the current computational practice, enriched by a few illustrative examples, this review provides readers with the theoretical background and practical knowledge needed to select the most appropriate parameters for performing the calculations, to anticipate possible problems, and to critically evaluate the reliability of their computational results. Common reasons for mistakes are also discussed; in particular, the importance of the correct evaluation of conformational ensembles of flexible molecules (an aspect often overlooked in current research) is stressed.

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Year:  2019        PMID: 31166350     DOI: 10.1039/c9np00018f

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  15 in total

Review 1.  MicroED in natural product and small molecule research.

Authors:  Emma Danelius; Steve Halaby; Wilfred A van der Donk; Tamir Gonen
Journal:  Nat Prod Rep       Date:  2020-09-17       Impact factor: 13.423

Review 2.  ECD exciton chirality method today: a modern tool for determining absolute configurations.

Authors:  Gennaro Pescitelli
Journal:  Chirality       Date:  2021-11-17       Impact factor: 2.183

3.  A Collection of Bioactive Nitrogen-Containing Molecules from the Marine Sponge Acanthostrongylophora ingens.

Authors:  Germana Esposito; Linh H Mai; Arlette Longeon; Alfonso Mangoni; Emilie Durieu; Laurent Meijer; Rob Van Soest; Valeria Costantino; Marie-Lise Bourguet-Kondracki
Journal:  Mar Drugs       Date:  2019-08-15       Impact factor: 5.118

4.  Assignment of Vibrational Circular Dichroism Cross-Referenced Electronic Circular Dichroism Spectra of Flexible Foldamer Building Blocks: Towards Assigning Pure Chiroptical Properties of Foldamers.

Authors:  Viktor Farkas; Adrienn Nagy; Dóra K Menyhárd; András Perczel
Journal:  Chemistry       Date:  2019-10-23       Impact factor: 5.236

5.  Dynamic Induction of Optical Activity in Triarylmethanols and Their Carbocations.

Authors:  Bartosz Stasiak; Agnieszka Czapik; Marcin Kwit
Journal:  J Org Chem       Date:  2020-12-22       Impact factor: 4.354

6.  Density Functional Theory (DFT)-Aided Structure Elucidation of Linear Diterpenes from the Irish Brown Seaweed Bifurcaria bifurcata.

Authors:  Vangelis Smyrniotopoulos; Daria Firsova; Howard Fearnhead; Laura Grauso; Alfonso Mangoni; Deniz Tasdemir
Journal:  Mar Drugs       Date:  2021-01-19       Impact factor: 5.118

7.  Stable Catechol Keto Tautomers in Cytotoxic Heterodimeric Cyclic Diarylheptanoids from the Seagrass Zostera marina.

Authors:  Yan Li; Laura Grauso; Silvia Scarpato; Nunzio Antonio Cacciola; Francesca Borrelli; Christian Zidorn; Alfonso Mangoni
Journal:  Org Lett       Date:  2021-09-07       Impact factor: 6.005

8.  Pyrenosetin D, a New Pentacyclic Decalinoyltetramic Acid Derivative from the Algicolous Fungus Pyrenochaetopsis sp. FVE-087.

Authors:  Bicheng Fan; Pradeep Dewapriya; Fengjie Li; Laura Grauso; Martina Blümel; Alfonso Mangoni; Deniz Tasdemir
Journal:  Mar Drugs       Date:  2020-05-26       Impact factor: 5.118

9.  Point-to-Axial Chirality Transmission: A Highly Sensitive Triaryl Chirality Probe for Stereochemical Assignments of Amines.

Authors:  Tomasz Mądry; Agnieszka Czapik; Marcin Kwit
Journal:  J Org Chem       Date:  2020-08-11       Impact factor: 4.354

10.  Synthesis, Absolute Configuration, Antibacterial, and Antifungal Activities of Novel Benzofuryl β-Amino Alcohols.

Authors:  Agnieszka Tafelska-Kaczmarek; Renata Kołodziejska; Marcin Kwit; Bartosz Stasiak; Magdalena Wypij; Patrycja Golińska
Journal:  Materials (Basel)       Date:  2020-09-14       Impact factor: 3.623

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