Literature DB >> 33466464

The Role of lncRNAs in Gene Expression Regulation through mRNA Stabilization.

Maialen Sebastian-delaCruz1,2, Itziar Gonzalez-Moro2,3, Ane Olazagoitia-Garmendia1,2, Ainara Castellanos-Rubio1,2,4,5, Izortze Santin2,3,5.   

Abstract

mRNA stability influences gene expression and translation in almost all living organisms, and the levels of mRNA molecules in the cell are determined by a balance between production and decay. Maintaining an accurate balance is crucial for the correct function of a wide variety of biological processes and to maintain an appropriate cellular homeostasis. Long non-coding RNAs (lncRNAs) have been shown to participate in the regulation of gene expression through different molecular mechanisms, including mRNA stabilization. In this review we provide an overview on the molecular mechanisms by which lncRNAs modulate mRNA stability and decay. We focus on how lncRNAs interact with RNA binding proteins and microRNAs to avoid mRNA degradation, and also on how lncRNAs modulate epitranscriptomic marks that directly impact on mRNA stability.

Entities:  

Keywords:  RNA binding protein; gene expression; long non-coding RNA; mRNA stability; microRNA

Year:  2021        PMID: 33466464      PMCID: PMC7839045          DOI: 10.3390/ncrna7010003

Source DB:  PubMed          Journal:  Noncoding RNA        ISSN: 2311-553X


  115 in total

Review 1.  Nonsense-Mediated mRNA Decay Begins Where Translation Ends.

Authors:  Evangelos D Karousis; Oliver Mühlemann
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-02-01       Impact factor: 10.005

2.  Differentially expressed protein Pdcd4 inhibits tumor promoter-induced neoplastic transformation.

Authors:  J L Cmarik; H Min; G Hegamyer; S Zhan; M Kulesz-Martin; H Yoshinaga; S Matsuhashi; N H Colburn
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

3.  Long non-coding RNA gadd7 interacts with TDP-43 and regulates Cdk6 mRNA decay.

Authors:  Xuefeng Liu; Dan Li; Weimin Zhang; Mingzhou Guo; Qimin Zhan
Journal:  EMBO J       Date:  2012-10-26       Impact factor: 11.598

4.  A long noncoding RNA associated with susceptibility to celiac disease.

Authors:  Ainara Castellanos-Rubio; Nora Fernandez-Jimenez; Radomir Kratchmarov; Xiaobing Luo; Govind Bhagat; Peter H R Green; Robert Schneider; Megerditch Kiledjian; Jose Ramon Bilbao; Sankar Ghosh
Journal:  Science       Date:  2016-04-01       Impact factor: 47.728

Review 5.  Posttranscriptional regulation of gene networks by GU-rich elements and CELF proteins.

Authors:  Irina A Vlasova; Paul R Bohjanen
Journal:  RNA Biol       Date:  2008-10-23       Impact factor: 4.652

6.  A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells.

Authors:  Per Johnsson; Amanda Ackley; Linda Vidarsdottir; Weng-Onn Lui; Martin Corcoran; Dan Grandér; Kevin V Morris
Journal:  Nat Struct Mol Biol       Date:  2013-02-24       Impact factor: 15.369

Review 7.  Revealing protein-lncRNA interaction.

Authors:  Fabrizio Ferrè; Alessio Colantoni; Manuela Helmer-Citterich
Journal:  Brief Bioinform       Date:  2015-06-02       Impact factor: 11.622

8.  Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription.

Authors:  Xiangting Wang; Shigeki Arai; Xiaoyuan Song; Donna Reichart; Kun Du; Gabriel Pascual; Paul Tempst; Michael G Rosenfeld; Christopher K Glass; Riki Kurokawa
Journal:  Nature       Date:  2008-05-28       Impact factor: 49.962

9.  Long noncoding RNA OCC-1 suppresses cell growth through destabilizing HuR protein in colorectal cancer.

Authors:  Yang Lan; Xuewei Xiao; Zhengchi He; Yu Luo; Chuanfang Wu; Ling Li; Xu Song
Journal:  Nucleic Acids Res       Date:  2018-06-20       Impact factor: 16.971

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  9 in total

Review 1.  Tumor immune microenvironment lncRNAs.

Authors:  Eun-Gyeong Park; Sung-Jin Pyo; Youxi Cui; Sang-Ho Yoon; Jin-Wu Nam
Journal:  Brief Bioinform       Date:  2022-01-17       Impact factor: 11.622

Review 2.  Emerging biology of noncoding RNAs in malaria parasites.

Authors:  Karina Simantov; Manish Goyal; Ron Dzikowski
Journal:  PLoS Pathog       Date:  2022-07-07       Impact factor: 7.464

3.  Exosomal lncRNA TUG1 derived from human urine-derived stem cells attenuates renal ischemia/reperfusion injury by interacting with SRSF1 to regulate ASCL4-mediated ferroptosis.

Authors:  Zejia Sun; Jiyue Wu; Qing Bi; Wei Wang
Journal:  Stem Cell Res Ther       Date:  2022-07-15       Impact factor: 8.079

4.  Long Noncoding RNA HCP5 Contributes to Nasopharyngeal Carcinoma Progression by Targeting MicroRNA-128-3p.

Authors:  Gangyong Miao; Bin Liu; Keji Ling; Tao Peng; En Zhou; Sijun Xie; Zhiqiang Tan
Journal:  J Oncol       Date:  2022-05-12       Impact factor: 4.501

5.  Post-Transcriptional Regulation through Long Non-Coding RNAs (lncRNAs).

Authors:  Giuseppina Pisignano; Michael Ladomery
Journal:  Noncoding RNA       Date:  2021-04-29

Review 6.  ABHD11-AS1: An Emerging Long Non-Coding RNA (lncRNA) with Clinical Significance in Human Malignancies.

Authors:  Upendarrao Golla; Kishore Sesham; Siva Dallavalasa; Naresh Kumar Manda; Sambamoorthy Unnam; Arun Kumar Sanapala; Sharada Nalla; Susmitha Kondam; Rajesh Kumar
Journal:  Noncoding RNA       Date:  2022-03-01

7.  Integrated analysis of lncRNAs and mRNAs by RNA-Seq in secondary hair follicle development and cycling (anagen, catagen and telogen) of Jiangnan cashmere goat (Capra hircus).

Authors:  Cuiling Wu; Chongkai Qin; Xuefeng Fu; Xixia Huang; Kechuan Tian
Journal:  BMC Vet Res       Date:  2022-05-06       Impact factor: 2.792

Review 8.  Identification of novel key regulatory lncRNAs in gastric adenocarcinoma.

Authors:  Houri Razavi; Ali Katanforosh
Journal:  BMC Genomics       Date:  2022-05-07       Impact factor: 4.547

9.  Long Non-Coding RNAs in Cardiac and Pulmonary Fibroblasts and Fibrosis.

Authors:  Mirolyuba Ilieva; Shizuka Uchida
Journal:  Noncoding RNA       Date:  2022-07-15
  9 in total

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