Literature DB >> 33458320

External validation of deep learning-based contouring of head and neck organs at risk.

Ellen J L Brunenberg1, Isabell K Steinseifer1, Sven van den Bosch1, Johannes H A M Kaanders1, Charlotte L Brouwer2, Mark J Gooding3, Wouter van Elmpt4, René Monshouwer1.   

Abstract

BACKGROUND AND
PURPOSE: Head and neck (HN) radiotherapy can benefit from automatic delineation of tumor and surrounding organs because of the complex anatomy and the regular need for adaptation. The aim of this study was to assess the performance of a commercially available deep learning contouring (DLC) model on an external validation set.
MATERIALS AND METHODS: The CT-based DLC model, trained at the University Medical Center Groningen (UMCG), was applied to an independent set of 58 patients from the Radboud University Medical Center (RUMC). DLC results were compared to the RUMC manual reference using the Dice similarity coefficient (DSC) and 95th percentile of Hausdorff distance (HD95). Craniocaudal spatial information was added by calculating binned measures. In addition, a qualitative evaluation compared the acceptance of manual and DLC contours in both groups of observers.
RESULTS: Good correspondence was shown for the mandible (DSC 0.90; HD95 3.6 mm). Performance was reasonable for the glandular OARs, brainstem and oral cavity (DSC 0.78-0.85, HD95 3.7-7.3 mm). The other aerodigestive tract OARs showed only moderate agreement (DSC 0.53-0.65, HD95 around 9 mm). The binned measures displayed the largest deviations caudally and/or cranially.
CONCLUSIONS: This study demonstrates that the DLC model can provide a reasonable starting point for delineation when applied to an independent patient cohort. The qualitative evaluation did not reveal large differences in the interpretation of contouring guidelines between RUMC and UMCG observers.
© 2020 The Author(s).

Entities:  

Keywords:  Auto-contouring; Contour comparison; Deep learning; Head & neck cancer

Year:  2020        PMID: 33458320      PMCID: PMC7807543          DOI: 10.1016/j.phro.2020.06.006

Source DB:  PubMed          Journal:  Phys Imaging Radiat Oncol        ISSN: 2405-6316


  25 in total

1.  Automatic delineation for replanning in nasopharynx radiotherapy: what is the agreement among experts to be considered as benchmark?

Authors:  Gian Carlo Mattiucci; Luca Boldrini; Giuditta Chiloiro; Giuseppe Roberto D'Agostino; Silvia Chiesa; Fiorenza De Rose; Luigi Azario; Danilo Pasini; Maria Antonietta Gambacorta; Mario Balducci; Vincenzo Valentini
Journal:  Acta Oncol       Date:  2013-08-19       Impact factor: 4.089

2.  Deep Learning-Based Delineation of Head and Neck Organs at Risk: Geometric and Dosimetric Evaluation.

Authors:  Ward van Rooij; Max Dahele; Hugo Ribeiro Brandao; Alexander R Delaney; Berend J Slotman; Wilko F Verbakel
Journal:  Int J Radiat Oncol Biol Phys       Date:  2019-03-02       Impact factor: 7.038

Review 3.  Vision 20/20: perspectives on automated image segmentation for radiotherapy.

Authors:  Gregory Sharp; Karl D Fritscher; Vladimir Pekar; Marta Peroni; Nadya Shusharina; Harini Veeraraghavan; Jinzhong Yang
Journal:  Med Phys       Date:  2014-05       Impact factor: 4.071

4.  Clinical evaluation of atlas and deep learning based automatic contouring for lung cancer.

Authors:  Tim Lustberg; Johan van Soest; Mark Gooding; Devis Peressutti; Paul Aljabar; Judith van der Stoep; Wouter van Elmpt; Andre Dekker
Journal:  Radiother Oncol       Date:  2017-12-05       Impact factor: 6.280

5.  Benefits of deep learning for delineation of organs at risk in head and neck cancer.

Authors:  J van der Veen; S Willems; S Deschuymer; D Robben; W Crijns; F Maes; S Nuyts
Journal:  Radiother Oncol       Date:  2019-05-27       Impact factor: 6.280

6.  Segmentation of organs-at-risks in head and neck CT images using convolutional neural networks.

Authors:  Bulat Ibragimov; Lei Xing
Journal:  Med Phys       Date:  2017-02       Impact factor: 4.071

7.  Improving automatic delineation for head and neck organs at risk by Deep Learning Contouring.

Authors:  Lisanne V van Dijk; Lisa Van den Bosch; Paul Aljabar; Devis Peressutti; Stefan Both; Roel J H M Steenbakkers; Johannes A Langendijk; Mark J Gooding; Charlotte L Brouwer
Journal:  Radiother Oncol       Date:  2019-10-22       Impact factor: 6.280

8.  Uniform FDG-PET guided GRAdient Dose prEscription to reduce late Radiation Toxicity (UPGRADE-RT): study protocol for a randomized clinical trial with dose reduction to the elective neck in head and neck squamous cell carcinoma.

Authors:  Sven van den Bosch; Tim Dijkema; Martina C Kunze-Busch; Chris H J Terhaard; Cornelis P J Raaijmakers; Patricia A H Doornaert; Frank J P Hoebers; Marije R Vergeer; Bas Kreike; Oda B Wijers; Wim J G Oyen; Johannes H A M Kaanders
Journal:  BMC Cancer       Date:  2017-03-21       Impact factor: 4.430

9.  Geometric and dosimetric evaluations of atlas-based segmentation methods of MR images in the head and neck region.

Authors:  J P Kieselmann; C P Kamerling; N Burgos; M J Menten; C D Fuller; S Nill; M J Cardoso; U Oelfke
Journal:  Phys Med Biol       Date:  2018-07-11       Impact factor: 3.609

Review 10.  The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).

Authors:  Bjoern H Menze; Andras Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth Gerstner; Marc-André Weber; Tal Arbel; Brian B Avants; Nicholas Ayache; Patricia Buendia; D Louis Collins; Nicolas Cordier; Jason J Corso; Antonio Criminisi; Tilak Das; Hervé Delingette; Çağatay Demiralp; Christopher R Durst; Michel Dojat; Senan Doyle; Joana Festa; Florence Forbes; Ezequiel Geremia; Ben Glocker; Polina Golland; Xiaotao Guo; Andac Hamamci; Khan M Iftekharuddin; Raj Jena; Nigel M John; Ender Konukoglu; Danial Lashkari; José Antonió Mariz; Raphael Meier; Sérgio Pereira; Doina Precup; Stephen J Price; Tammy Riklin Raviv; Syed M S Reza; Michael Ryan; Duygu Sarikaya; Lawrence Schwartz; Hoo-Chang Shin; Jamie Shotton; Carlos A Silva; Nuno Sousa; Nagesh K Subbanna; Gabor Szekely; Thomas J Taylor; Owen M Thomas; Nicholas J Tustison; Gozde Unal; Flor Vasseur; Max Wintermark; Dong Hye Ye; Liang Zhao; Binsheng Zhao; Darko Zikic; Marcel Prastawa; Mauricio Reyes; Koen Van Leemput
Journal:  IEEE Trans Med Imaging       Date:  2014-12-04       Impact factor: 10.048

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  6 in total

Review 1.  Artificial intelligence for assisting cancer diagnosis and treatment in the era of precision medicine.

Authors:  Zi-Hang Chen; Li Lin; Chen-Fei Wu; Chao-Feng Li; Rui-Hua Xu; Ying Sun
Journal:  Cancer Commun (Lond)       Date:  2021-10-06

2.  Deep learning tools for the cancer clinic: an open-source framework with head and neck contour validation.

Authors:  John C Asbach; Anurag K Singh; L Shawn Matott; Anh H Le
Journal:  Radiat Oncol       Date:  2022-02-08       Impact factor: 3.481

3.  Machine Learning for Head and Neck Cancer: A Safe Bet?-A Clinically Oriented Systematic Review for the Radiation Oncologist.

Authors:  Stefania Volpe; Matteo Pepa; Mattia Zaffaroni; Federica Bellerba; Riccardo Santamaria; Giulia Marvaso; Lars Johannes Isaksson; Sara Gandini; Anna Starzyńska; Maria Cristina Leonardi; Roberto Orecchia; Daniela Alterio; Barbara Alicja Jereczek-Fossa
Journal:  Front Oncol       Date:  2021-11-18       Impact factor: 6.244

4.  Dose-volume-based evaluation of convolutional neural network-based auto-segmentation of thoracic organs at risk.

Authors:  Noémie Johnston; Jeffrey De Rycke; Yolande Lievens; Marc van Eijkeren; Jan Aelterman; Eva Vandersmissen; Stephan Ponte; Barbara Vanderstraeten
Journal:  Phys Imaging Radiat Oncol       Date:  2022-07-25

5.  Strategies for tackling the class imbalance problem of oropharyngeal primary tumor segmentation on magnetic resonance imaging.

Authors:  Roque Rodríguez Outeiral; Paula Bos; Hedda J van der Hulst; Abrahim Al-Mamgani; Bas Jasperse; Rita Simões; Uulke A van der Heide
Journal:  Phys Imaging Radiat Oncol       Date:  2022-08-13

6.  The Chinese Society of Clinical Oncology (CSCO) clinical guidelines for the diagnosis and treatment of nasopharyngeal carcinoma.

Authors:  Ling-Long Tang; Yu-Pei Chen; Chuan-Ben Chen; Ming-Yuan Chen; Nian-Yong Chen; Xiao-Zhong Chen; Xiao-Jing Du; Wen-Feng Fang; Mei Feng; Jin Gao; Fei Han; Xia He; Chao-Su Hu; De-Sheng Hu; Guang-Yuan Hu; Hao Jiang; Wei Jiang; Feng Jin; Jin-Yi Lang; Jin-Gao Li; Shao-Jun Lin; Xu Liu; Qiu-Fang Liu; Lin Ma; Hai-Qiang Mai; Ji-Yong Qin; Liang-Fang Shen; Ying Sun; Pei-Guo Wang; Ren-Sheng Wang; Ruo-Zheng Wang; Xiao-Shen Wang; Ying Wang; Hui Wu; Yun-Fei Xia; Shao-Wen Xiao; Kun-Yu Yang; Jun-Lin Yi; Xiao-Dong Zhu; Jun Ma
Journal:  Cancer Commun (Lond)       Date:  2021-10-26
  6 in total

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