| Literature DB >> 33458034 |
Puteri Nur Syahzanani Jahari1, Shahfiz Mohd Azman2, Kaviarasu Munian2, Nor Hazwani Ahmad Ruzman2, Mohd Shahir Shamsir3, Stine R Richter4, M Thomas P Gilbert4, Faezah Mohd Salleh1.
Abstract
The mitogenome of a plantain squirrel, Callosciurus notatus, collected from Bukit Tarek Forest Reserve (Extension), Selangor, Malaysia was sequenced using BGISEQ-500RS technology. The 16,582 bp mitogenome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 control region. A phylogenetic and BLASTn analysis against other available datasets showed that the mitogenome matched with 99.49% similarity to a previously published C. notatus mitogenome from Peninsular Malaysia. However, it also diverged by nearly 8% (92.24% match) from a second previously published mitogenome for the same species, sampled in East Kalimantan, Indonesia. This suggests a difference in landscape features between both localities might affect its genetic connectivity.Entities:
Keywords: Callosciurus notatus; mitogenome; phylogenetic analysis
Year: 2020 PMID: 33458034 PMCID: PMC7782351 DOI: 10.1080/23802359.2020.1797583
Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN: 2380-2359 Impact factor: 0.658