Literature DB >> 33521264

The first mitochondrial genome data of an old world fruit bat, Cynopterus sphinx from Malaysia.

Puteri Nur Syahzanani Jahari1, Shahfiz Mohd Azman2, Kaviarasu Munian2, Nur Alwani Zakaria2, Mohd Shahir Shamsir Omar3, Stine R Richter4, Faezah Mohd Salleh1.   

Abstract

We assembled the complete mitogenome of Cynopterus sphinx (Vahl, 1797) of the family Pteropodidae originating from Malaysia. The total mitogenome size was 16,710bp which consists of 37 genes (13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and one control region). A phylogenetic and BLASTn result showed the mitogenome sequence in this study varies by nearly 7% (93.48% similarity) from the same species in Cambodia. The next closest match of BLASTn was at 92% similarity to the C. brachyotis. This suggests the species-complex in Cynopterus sp. has given rise to the genetic variability.
© 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Cynopterus sphinx; genetic variability; phylogenetic analysis; species-complex

Year:  2021        PMID： 33521264      PMCID： PMC7808394          DOI： 10.1080/23802359.2020.1846472

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  8 in total

1.  Comparative population structure of Cynopterus fruit bats in peninsular Malaysia and southern Thailand.

Authors:  Polly Campbell; Christopher J Schneider; Adura M Adnan; Akbar Zubaid; Thomas H Kunz
Journal:  Mol Ecol       Date:  2006-01       Impact factor: 6.185

2.  Phylogeny and phylogeography of Old World fruit bats in the Cynopterus brachyotis complex.

Authors:  Polly Campbell; Christopher J Schneider; Adura M Adnan; Akbar Zubaid; Thomas H Kunz
Journal:  Mol Phylogenet Evol       Date:  2004-12       Impact factor: 4.286

3.  Characteristics of complete mitogenome of the lesser short-nosed fruit bat Cynopterus brachyotis (Chiroptera: Pteropodidae) in Malaysia.

Authors:  Kwang Bae Yoon; Ji Young Kim; Yung Chul Park
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2014-11-24       Impact factor: 1.514

4.  MITOS: improved de novo metazoan mitochondrial genome annotation.

Authors:  Matthias Bernt; Alexander Donath; Frank Jühling; Fabian Externbrink; Catherine Florentz; Guido Fritzsch; Joern Pütz; Martin Middendorf; Peter F Stadler
Journal:  Mol Phylogenet Evol       Date:  2012-09-07       Impact factor: 4.286

5.  AdapterRemoval v2: rapid adapter trimming, identification, and read merging.

Authors:  Mikkel Schubert; Stinus Lindgreen; Ludovic Orlando
Journal:  BMC Res Notes       Date:  2016-02-12

6.  The first complete mitochondrial genome data of Hippocampus kuda originating from Malaysia.

Authors:  Puteri Nur Syahzanani Jahari; Nur Fatihah Abdul Malik; Mohd Shahir Shamsir; M Thomas P Gilbert; Faezah Mohd Salleh
Journal:  Data Brief       Date:  2020-05-21

7.  Molecular identification and phylogenetic analysis of a Callosciurus notatus complete mitogenome from Peninsular Malaysia.

Authors:  Puteri Nur Syahzanani Jahari; Shahfiz Mohd Azman; Kaviarasu Munian; Nor Hazwani Ahmad Ruzman; Mohd Shahir Shamsir; Stine R Richter; M Thomas P Gilbert; Faezah Mohd Salleh
Journal:  Mitochondrial DNA B Resour       Date:  2020-08-26       Impact factor: 0.658

8.  Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.

Authors:  Christoph Hahn; Lutz Bachmann; Bastien Chevreux
Journal:  Nucleic Acids Res       Date:  2013-05-09       Impact factor: 16.971
  8 in total
  1 in total

1.  The first complete mitochondrial genome sequence of Cynopterusbrachyotis (Chiroptera, Pteropodidae) from the Philippines.

Authors:  Paul Lorenzo A Gaite; Wilson F Aala; Michael G Bacus; Christian C Labrador; April Mae M Numeron; Lief Erikson D Gamalo; Lyre Anni E Murao
Journal:  Biodivers Data J       Date:  2022-02-14
  1 in total

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