Literature DB >> 33445902

A generalized class of strongly stable and dimension-free T-RPMD integrators.

Jorge L Rosa-Raíces1, Jiace Sun1, Nawaf Bou-Rabee2, Thomas F Miller1.   

Abstract

Recent work shows that strong stability and dimensionality freedom are essential for robust numerical integration of thermostatted ring-polymer molecular dynamics (T-RPMD) and path-integral molecular dynamics, without which standard integrators exhibit non-ergodicity and other pathologies [R. Korol et al., J. Chem. Phys. 151, 124103 (2019) and R. Korol et al., J. Chem. Phys. 152, 104102 (2020)]. In particular, the BCOCB scheme, obtained via Cayley modification of the standard BAOAB scheme, features a simple reparametrization of the free ring-polymer sub-step that confers strong stability and dimensionality freedom and has been shown to yield excellent numerical accuracy in condensed-phase systems with large time steps. Here, we introduce a broader class of T-RPMD numerical integrators that exhibit strong stability and dimensionality freedom, irrespective of the Ornstein-Uhlenbeck friction schedule. In addition to considering equilibrium accuracy and time step stability as in previous work, we evaluate the integrators on the basis of their rates of convergence to equilibrium and their efficiency at evaluating equilibrium expectation values. Within the generalized class, we find BCOCB to be superior with respect to accuracy and efficiency for various configuration-dependent observables, although other integrators within the generalized class perform better for velocity-dependent quantities. Extensive numerical evidence indicates that the stated performance guarantees hold for the strongly anharmonic case of liquid water. Both analytical and numerical results indicate that BCOCB excels over other known integrators in terms of accuracy, efficiency, and stability with respect to time step for practical applications.

Entities:  

Year:  2021        PMID: 33445902      PMCID: PMC7796824          DOI: 10.1063/5.0036954

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  26 in total

1.  Quantum diffusion in liquid water from ring polymer molecular dynamics.

Authors:  Thomas F Miller; David E Manolopoulos
Journal:  J Chem Phys       Date:  2005-10-15       Impact factor: 3.488

2.  Chemical reaction rates from ring polymer molecular dynamics.

Authors:  Ian R Craig; David E Manolopoulos
Journal:  J Chem Phys       Date:  2005-02-22       Impact factor: 3.488

3.  On the short-time limit of ring polymer molecular dynamics.

Authors:  Bastiaan J Braams; David E Manolopoulos
Journal:  J Chem Phys       Date:  2006-09-28       Impact factor: 3.488

4.  On the applicability of centroid and ring polymer path integral molecular dynamics for vibrational spectroscopy.

Authors:  Alexander Witt; Sergei D Ivanov; Motoyuki Shiga; Harald Forbert; Dominik Marx
Journal:  J Chem Phys       Date:  2009-05-21       Impact factor: 3.488

5.  Competing quantum effects in the dynamics of a flexible water model.

Authors:  Scott Habershon; Thomas E Markland; David E Manolopoulos
Journal:  J Chem Phys       Date:  2009-07-14       Impact factor: 3.488

6.  Communication: Relation of centroid molecular dynamics and ring-polymer molecular dynamics to exact quantum dynamics.

Authors:  Timothy J H Hele; Michael J Willatt; Andrea Muolo; Stuart C Althorpe
Journal:  J Chem Phys       Date:  2015-05-21       Impact factor: 3.488

7.  Ab initio thermodynamics of liquid and solid water.

Authors:  Bingqing Cheng; Edgar A Engel; Jörg Behler; Christoph Dellago; Michele Ceriotti
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-04       Impact factor: 11.205

8.  Ring-polymer molecular dynamics: quantum effects in chemical dynamics from classical trajectories in an extended phase space.

Authors:  Scott Habershon; David E Manolopoulos; Thomas E Markland; Thomas F Miller
Journal:  Annu Rev Phys Chem       Date:  2013-01-07       Impact factor: 12.703

9.  Path integral Liouville dynamics for thermal equilibrium systems.

Authors:  Jian Liu
Journal:  J Chem Phys       Date:  2014-06-14       Impact factor: 3.488

10.  An open-chain imaginary-time path-integral sampling approach to the calculation of approximate symmetrized quantum time correlation functions.

Authors:  Joseph R Cendagorta; Zlatko Bačić; Mark E Tuckerman
Journal:  J Chem Phys       Date:  2018-03-14       Impact factor: 3.488

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.