Literature DB >> 33439726

BOIN Suite: A Software Platform to Design and Implement Novel Early-Phase Clinical Trials.

Yanhong Zhou1, Ruitao Lin1, Ying-Wei Kuo1, J Jack Lee1, Ying Yuan1.   

Abstract

PURPOSE: Using novel Bayesian adaptive designs has great potential to improve the efficiency of early-phase clinical trials. A major barrier for clinical researchers to adopt novel designs is the lack of easy-to-use software. Our purpose is to develop a user-friendly software platform to implement novel clinical trial designs that address various challenges in early-phase dose-finding trials.
METHODS: We used R Shiny to develop a web-based software platform to facilitate the use of recent novel adaptive designs.
RESULTS: We developed a web-based software suite, called Bayesian optimal interval (BOIN) suite, which includes R Shiny applications to handle various clinical settings, including single-agent phase I trials with and without prior information, trials with late-onset toxicity, trials to find the optimal biological dose based on risk-benefit trade-off, and drug combination trials to find a single maximum tolerated dose (MTD) or the MTD contour. The applications are built using the same software architecture to ensure the best and a uniform user experience, and they are developed using a proven software development standard operating procedure to ensure accuracy, robustness, and reproducibility. The suite is freely available with internet access and a web browser without the need of installing any other software.
CONCLUSION: The BOIN suite allows clinical researchers to design various types of early-phase clinical trials under a unified framework. This work is extremely important because it not only advances the clinical research and drug development by facilitating the use of novel trial designs with optimal performance but also enhances collaborations between biostatisticians and clinicians by disseminating novel statistical methodology to broader scientific communities through user-friendly software. The BOIN suite establishes a KISS principle: keep it simple, but smart.

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Year:  2021        PMID: 33439726      PMCID: PMC8462603          DOI: 10.1200/CCI.20.00122

Source DB:  PubMed          Journal:  JCO Clin Cancer Inform        ISSN: 2473-4276


  17 in total

1.  Bayesian optimal interval design for dose finding in drug-combination trials.

Authors:  Ruitao Lin; Guosheng Yin
Journal:  Stat Methods Med Res       Date:  2015-07-15       Impact factor: 3.021

2.  BOIN12: Bayesian Optimal Interval Phase I/II Trial Design for Utility-Based Dose Finding in Immunotherapy and Targeted Therapies.

Authors:  Ruitao Lin; Yanhong Zhou; Fangrong Yan; Daniel Li; Ying Yuan
Journal:  JCO Precis Oncol       Date:  2020-11-16

3.  TITE-BOIN-ET: Time-to-event Bayesian optimal interval design to accelerate dose-finding based on both efficacy and toxicity outcomes.

Authors:  Kentaro Takeda; Satoshi Morita; Masataka Taguri
Journal:  Pharm Stat       Date:  2019-12-12       Impact factor: 1.894

4.  Accuracy, Safety, and Reliability of Novel Phase I Trial Designs.

Authors:  Heng Zhou; Ying Yuan; Lei Nie
Journal:  Clin Cancer Res       Date:  2018-04-16       Impact factor: 12.531

Review 5.  Bayesian clinical trials in action.

Authors:  J Jack Lee; Caleb T Chu
Journal:  Stat Med       Date:  2012-06-18       Impact factor: 2.373

6.  A modified toxicity probability interval method for dose-finding trials.

Authors:  Yuan Ji; Ping Liu; Yisheng Li; B Nebiyou Bekele
Journal:  Clin Trials       Date:  2010-10-08       Impact factor: 2.486

7.  Sequential designs for phase I clinical trials with late-onset toxicities.

Authors:  Y K Cheung; R Chappell
Journal:  Biometrics       Date:  2000-12       Impact factor: 2.571

8.  Time-to-Event Bayesian Optimal Interval Design to Accelerate Phase I Trials.

Authors:  Ying Yuan; Ruitao Lin; Daniel Li; Lei Nie; Katherine E Warren
Journal:  Clin Cancer Res       Date:  2018-05-16       Impact factor: 12.531

9.  Cancer phase I clinical trials: efficient dose escalation with overdose control.

Authors:  J Babb; A Rogatko; S Zacks
Journal:  Stat Med       Date:  1998-05-30       Impact factor: 2.373

10.  A utility-based Bayesian optimal interval (U-BOIN) phase I/II design to identify the optimal biological dose for targeted and immune therapies.

Authors:  Yanhong Zhou; J Jack Lee; Ying Yuan
Journal:  Stat Med       Date:  2019-10-17       Impact factor: 2.373

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  5 in total

Review 1.  An overview of the BOIN design and its current extensions for novel early-phase oncology trials.

Authors:  Revathi Ananthakrishnan; Ruitao Lin; Chunsheng He; Yanping Chen; Daniel Li; Michael LaValley
Journal:  Contemp Clin Trials Commun       Date:  2022-06-13

Review 2.  BOIN: a novel Bayesian design platform to accelerate early phase brain tumor clinical trials.

Authors:  Ying Yuan; Jing Wu; Mark R Gilbert
Journal:  Neurooncol Pract       Date:  2021-06-11

3.  Operating characteristics are needed to properly evaluate the scientific validity of phase I protocols.

Authors:  Nolan A Wages; Bethany Jablonski Horton; Mark R Conaway; Gina R Petroni
Journal:  Contemp Clin Trials       Date:  2021-07-25       Impact factor: 2.261

Review 4.  An Overview of Phase 2 Clinical Trial Designs.

Authors:  Pedro A Torres-Saavedra; Kathryn A Winter
Journal:  Int J Radiat Oncol Biol Phys       Date:  2021-08-04       Impact factor: 7.038

5.  IPDfromKM: reconstruct individual patient data from published Kaplan-Meier survival curves.

Authors:  Na Liu; Yanhong Zhou; J Jack Lee
Journal:  BMC Med Res Methodol       Date:  2021-06-01       Impact factor: 4.615

  5 in total

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