Literature DB >> 33420033

Mechanism of filament formation in UPA-promoted CARD8 and NLRP1 inflammasomes.

L Robert Hollingsworth1,2,3, Liron David1,2, Yang Li4, Andrew R Griswold5,6, Jianbin Ruan1,2,7, Humayun Sharif1,2, Pietro Fontana1,2, Elizabeth L Orth-He8, Tian-Min Fu1,2,9, Daniel A Bachovchin6,8,10, Hao Wu11,12,13.   

Abstract

NLRP1 and CARD8 are related cytosolic sensors that upon activation form supramolecular signalling complexes known as canonical inflammasomes, resulting in caspase-1 activation, cytokine maturation and/or pyroptotic cell death. NLRP1 and CARD8 use their C-terminal (CT) fragments containing a caspase recruitment domain (CARD) and the UPA (conserved in UNC5, PIDD, and ankyrins) subdomain for self-oligomerization, which in turn form the platform to recruit the inflammasome adaptor ASC (apoptosis-associated speck-like protein containing a CARD) or caspase-1, respectively. Here, we report cryo-EM structures of NLRP1-CT and CARD8-CT assemblies, in which the respective CARDs form central helical filaments that are promoted by oligomerized, but flexibly linked, UPAs surrounding the filaments. Through biochemical and cellular approaches, we demonstrate that the UPA itself reduces the threshold needed for NLRP1-CT and CARD8-CT filament formation and signalling. Structural analyses provide insights on the mode of ASC recruitment by NLRP1-CT and the contrasting direct recruitment of caspase-1 by CARD8-CT. We also discover that subunits in the central NLRP1CARD filament dimerize with additional exterior CARDs, which roughly doubles its thickness and is unique among all known CARD filaments. Finally, we engineer and determine the structure of an ASCCARD-caspase-1CARD octamer, which suggests that ASC uses opposing surfaces for NLRP1, versus caspase-1, recruitment. Together these structures capture the architecture and specificity of the active NLRP1 and CARD8 inflammasomes in addition to key heteromeric CARD-CARD interactions governing inflammasome signalling.

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Year:  2021        PMID: 33420033      PMCID: PMC7794386          DOI: 10.1038/s41467-020-20320-y

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  66 in total

1.  Molecular mechanism for NLRP6 inflammasome assembly and activation.

Authors:  Chen Shen; Alvin Lu; Wen Jun Xie; Jianbin Ruan; Roberto Negro; Edward H Egelman; Tian-Min Fu; Hao Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-23       Impact factor: 11.205

Review 2.  Helical assembly in the death domain (DD) superfamily.

Authors:  Ryan Ferrao; Hao Wu
Journal:  Curr Opin Struct Biol       Date:  2012-03-17       Impact factor: 6.809

3.  Caspases in Cell Death, Inflammation, and Pyroptosis.

Authors:  Sannula Kesavardhana; R K Subbarao Malireddi; Thirumala-Devi Kanneganti
Journal:  Annu Rev Immunol       Date:  2020-02-04       Impact factor: 28.527

Review 4.  Structural and mechanistic elucidation of inflammasome signaling by cryo-EM.

Authors:  Chen Shen; Humayun Sharif; Shiyu Xia; Hao Wu
Journal:  Curr Opin Struct Biol       Date:  2019-05-22       Impact factor: 6.809

5.  Crystal structure of the human NLRP9 pyrin domain reveals a bent N-terminal loop that may regulate inflammasome assembly.

Authors:  Hyun Ji Ha; Hyun Ho Park
Journal:  FEBS Lett       Date:  2020-06-28       Impact factor: 4.124

6.  High-Throughput Cryo-EM Enabled by User-Free Preprocessing Routines.

Authors:  Yilai Li; Jennifer N Cash; John J G Tesmer; Michael A Cianfrocco
Journal:  Structure       Date:  2020-04-14       Impact factor: 5.006

7.  Inhibition of Dpp8/9 Activates the Nlrp1b Inflammasome.

Authors:  Marian C Okondo; Sahana D Rao; Cornelius Y Taabazuing; Ashley J Chui; Sarah E Poplawski; Darren C Johnson; Daniel A Bachovchin
Journal:  Cell Chem Biol       Date:  2018-01-27       Impact factor: 8.116

8.  Structure of the NLRP1 caspase recruitment domain suggests potential mechanisms for its association with procaspase-1.

Authors:  Tengchuan Jin; James Curry; Patrick Smith; Jiansheng Jiang; T Sam Xiao
Journal:  Proteins       Date:  2013-04-20

9.  New tools for automated high-resolution cryo-EM structure determination in RELION-3.

Authors:  Jasenko Zivanov; Takanori Nakane; Björn O Forsberg; Dari Kimanius; Wim Jh Hagen; Erik Lindahl; Sjors Hw Scheres
Journal:  Elife       Date:  2018-11-09       Impact factor: 8.140

10.  DPP8/DPP9 inhibitor-induced pyroptosis for treatment of acute myeloid leukemia.

Authors:  Darren C Johnson; Cornelius Y Taabazuing; Marian C Okondo; Ashley J Chui; Sahana D Rao; Fiona C Brown; Casie Reed; Elizabeth Peguero; Elisa de Stanchina; Alex Kentsis; Daniel A Bachovchin
Journal:  Nat Med       Date:  2018-07-02       Impact factor: 53.440

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  12 in total

Review 1.  Mechanistic Insights into Gasdermin Pore Formation and Regulation in Pyroptosis.

Authors:  Chengliang Wang; Jianbin Ruan
Journal:  J Mol Biol       Date:  2021-10-08       Impact factor: 5.469

2.  KSHV-encoded ORF45 activates human NLRP1 inflammasome.

Authors:  Xing Yang; Jingfan Zhou; Chengrong Liu; Yafei Qu; Weili Wang; Maggie Z X Xiao; Fanxiu Zhu; Zhenshan Liu; Qiming Liang
Journal:  Nat Immunol       Date:  2022-05-26       Impact factor: 31.250

3.  Viral protein activates the NLRP1 inflammasome.

Authors:  Ella Hartenian; Petr Broz
Journal:  Nat Immunol       Date:  2022-06       Impact factor: 31.250

4.  DPP9 sequesters the C terminus of NLRP1 to repress inflammasome activation.

Authors:  L Robert Hollingsworth; Humayun Sharif; Andrew R Griswold; Pietro Fontana; Julian Mintseris; Kevin B Dagbay; Joao A Paulo; Steven P Gygi; Daniel A Bachovchin; Hao Wu
Journal:  Nature       Date:  2021-03-17       Impact factor: 49.962

5.  Dipeptidyl peptidase 9 sets a threshold for CARD8 inflammasome formation by sequestering its active C-terminal fragment.

Authors:  Humayun Sharif; L Robert Hollingsworth; Andrew R Griswold; Jeffrey C Hsiao; Qinghui Wang; Daniel A Bachovchin; Hao Wu
Journal:  Immunity       Date:  2021-05-20       Impact factor: 43.474

6.  The NLRP1 Inflammasome Induces Pyroptosis in Human Corneal Epithelial Cells.

Authors:  Andrew R Griswold; Hsin-Che Huang; Daniel A Bachovchin
Journal:  Invest Ophthalmol Vis Sci       Date:  2022-03-02       Impact factor: 4.799

Review 7.  Human NLRP1: From the shadows to center stage.

Authors:  Stefan Bauernfried; Veit Hornung
Journal:  J Exp Med       Date:  2021-12-15       Impact factor: 17.579

8.  Directionality of PYD filament growth determined by the transition of NLRP3 nucleation seeds to ASC elongation.

Authors:  Inga V Hochheiser; Heide Behrmann; Gregor Hagelueken; Juan F Rodríguez-Alcázar; Anja Kopp; Eicke Latz; Elmar Behrmann; Matthias Geyer
Journal:  Sci Adv       Date:  2022-05-13       Impact factor: 14.957

Review 9.  PIDD1 in cell cycle control, sterile inflammation and cell death.

Authors:  Elias S Weiler; Tamas G Szabo; Irmina Garcia-Carpio; Andreas Villunger
Journal:  Biochem Soc Trans       Date:  2022-04-29       Impact factor: 4.919

Review 10.  Chemical Modulation of Gasdermin-Mediated Pyroptosis and Therapeutic Potential.

Authors:  Christopher B Ryder; Hannah C Kondolf; Meghan E O'Keefe; Bowen Zhou; Derek W Abbott
Journal:  J Mol Biol       Date:  2021-08-03       Impact factor: 5.469

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