Literature DB >> 33417833

Biomolecular Condensates and Cancer.

Ann Boija1, Isaac A Klein2, Richard A Young3.   

Abstract

Malignant transformation is characterized by dysregulation of diverse cellular processes that have been the subject of detailed genetic, biochemical, and structural studies, but only recently has evidence emerged that many of these processes occur in the context of biomolecular condensates. Condensates are membrane-less bodies, often formed by liquid-liquid phase separation, that compartmentalize protein and RNA molecules with related functions. New insights from condensate studies portend a profound transformation in our understanding of cellular dysregulation in cancer. Here we summarize key features of biomolecular condensates, note where they have been implicated-or will likely be implicated-in oncogenesis, describe evidence that the pharmacodynamics of cancer therapeutics can be greatly influenced by condensates, and discuss some of the questions that must be addressed to further advance our understanding and treatment of cancer.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  biomolecular condensates; cancer; cancer therapeutics; dysregulated state; intrinsically disordered protein; phase separation

Mesh:

Substances:

Year:  2021        PMID: 33417833      PMCID: PMC8721577          DOI: 10.1016/j.ccell.2020.12.003

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  291 in total

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Journal:  Cell       Date:  2015-08-27       Impact factor: 41.582

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Authors:  Michèle Rouleau; Anand Patel; Michael J Hendzel; Scott H Kaufmann; Guy G Poirier
Journal:  Nat Rev Cancer       Date:  2010-03-04       Impact factor: 60.716

Review 3.  Epigenetic regulators and their impact on therapy in acute myeloid leukemia.

Authors:  Friederike Pastore; Ross L Levine
Journal:  Haematologica       Date:  2016-03       Impact factor: 9.941

Review 4.  Liquid-liquid phase separation in cellular signaling systems.

Authors:  P Andrew Chong; Julie D Forman-Kay
Journal:  Curr Opin Struct Biol       Date:  2016-08-20       Impact factor: 6.809

5.  A separation that's for the best: coming together at the PAS.

Authors:  Wayne D Hawkins; Daniel J Klionsky
Journal:  Cell Res       Date:  2020-05       Impact factor: 25.617

6.  c-Myc is a universal amplifier of expressed genes in lymphocytes and embryonic stem cells.

Authors:  Zuqin Nie; Gangqing Hu; Gang Wei; Kairong Cui; Arito Yamane; Wolfgang Resch; Ruoning Wang; Douglas R Green; Lino Tessarollo; Rafael Casellas; Keji Zhao; David Levens
Journal:  Cell       Date:  2012-09-28       Impact factor: 41.582

7.  Composition-dependent thermodynamics of intracellular phase separation.

Authors:  Joshua A Riback; Lian Zhu; Mylene C Ferrolino; Michele Tolbert; Diana M Mitrea; David W Sanders; Ming-Tzo Wei; Richard W Kriwacki; Clifford P Brangwynne
Journal:  Nature       Date:  2020-05-06       Impact factor: 49.962

8.  Identification and Characterization of Oncogenic SOS1 Mutations in Lung Adenocarcinoma.

Authors:  Diana Cai; Peter S Choi; Maya Gelbard; Matthew Meyerson
Journal:  Mol Cancer Res       Date:  2019-01-11       Impact factor: 5.852

Review 9.  Proteasome inhibitors in cancer therapy.

Authors:  Elisabet E Manasanch; Robert Z Orlowski
Journal:  Nat Rev Clin Oncol       Date:  2017-01-24       Impact factor: 66.675

10.  Phase transitions in the assembly of multivalent signalling proteins.

Authors:  Pilong Li; Sudeep Banjade; Hui-Chun Cheng; Soyeon Kim; Baoyu Chen; Liang Guo; Marc Llaguno; Javoris V Hollingsworth; David S King; Salman F Banani; Paul S Russo; Qiu-Xing Jiang; B Tracy Nixon; Michael K Rosen
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

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  37 in total

1.  BRD2 interconnects with BRD3 to facilitate Pol II transcription initiation and elongation to prime promoters for cell differentiation.

Authors:  Chenlu Wang; Qiqin Xu; Xianhong Zhang; Daniel S Day; Brian J Abraham; Kehuan Lun; Liang Chen; Jie Huang; Xiong Ji
Journal:  Cell Mol Life Sci       Date:  2022-06-04       Impact factor: 9.261

2.  Copy number amplification and SP1-activated lncRNA MELTF-AS1 regulates tumorigenesis by driving phase separation of YBX1 to activate ANXA8 in non-small cell lung cancer.

Authors:  Xiyi Lu; Jing Wang; Wei Wang; Chenfei Lu; Tianyu Qu; Xuezhi He; Xinyin Liu; Renhua Guo; Erbao Zhang
Journal:  Oncogene       Date:  2022-05-04       Impact factor: 9.867

Review 3.  Phase separation drives tumor pathogenesis and evolution: all roads lead to Rome.

Authors:  Xiang Gu; Ai Zhuang; Jie Yu; Peiwei Chai; Renbing Jia; Jing Ruan
Journal:  Oncogene       Date:  2022-02-08       Impact factor: 9.867

4.  Genetic variation associated with condensate dysregulation in disease.

Authors:  Salman F Banani; Lena K Afeyan; Susana W Hawken; Jonathan E Henninger; Alessandra Dall'Agnese; Victoria E Clark; Jesse M Platt; Ozgur Oksuz; Nancy M Hannett; Ido Sagi; Tong Ihn Lee; Richard A Young
Journal:  Dev Cell       Date:  2022-07-08       Impact factor: 13.417

Review 5.  Biomolecular Condensation: A New Phase in Cancer Research.

Authors:  Anupam K Chakravarty; Daniel J McGrail; Thomas M Lozanoski; Brandon S Dunn; David J H Shih; Kara M Cirillo; Sueda H Cetinkaya; Wenjin Jim Zheng; Gordon B Mills; S Stephen Yi; Daniel F Jarosz; Nidhi Sahni
Journal:  Cancer Discov       Date:  2022-09-02       Impact factor: 38.272

6.  Probing Liquid-Liquid Phase Separation of RNA-Binding Proteins In Vitro and In Vivo.

Authors:  Stephanie Heinrich; Maria Hondele
Journal:  Methods Mol Biol       Date:  2022

Review 7.  Learning the chemical grammar of biomolecular condensates.

Authors:  Henry R Kilgore; Richard A Young
Journal:  Nat Chem Biol       Date:  2022-06-27       Impact factor: 16.174

8.  Phase separation drives aberrant chromatin looping and cancer development.

Authors:  Jeong Hyun Ahn; Eric S Davis; Timothy A Daugird; Shuai Zhao; Ivana Yoseli Quiroga; Hidetaka Uryu; Jie Li; Aaron J Storey; Yi-Hsuan Tsai; Daniel P Keeley; Samuel G Mackintosh; Ricky D Edmondson; Stephanie D Byrum; Ling Cai; Alan J Tackett; Deyou Zheng; Wesley R Legant; Douglas H Phanstiel; Gang Greg Wang
Journal:  Nature       Date:  2021-06-23       Impact factor: 69.504

9.  The oncogenic transcription factor FUS-CHOP can undergo nuclear liquid-liquid phase separation.

Authors:  Izzy Owen; Debra Yee; Hala Wyne; Theodora Myrto Perdikari; Victoria Johnson; Jeremy Smyth; Robert Kortum; Nicolas L Fawzi; Frank Shewmaker
Journal:  J Cell Sci       Date:  2021-09-03       Impact factor: 5.235

10.  N6-Methyladenosine on mRNA facilitates a phase-separated nuclear body that suppresses myeloid leukemic differentiation.

Authors:  Yuanming Cheng; Wei Xie; Brian F Pickering; Karen L Chu; Angela M Savino; Xuejing Yang; Hanzhi Luo; Diu Tt Nguyen; Shanlan Mo; Ersilia Barin; Anthony Velleca; Thomas M Rohwetter; Dinshaw J Patel; Samie R Jaffrey; Michael G Kharas
Journal:  Cancer Cell       Date:  2021-05-27       Impact factor: 38.585

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