Literature DB >> 33415179

Cascaded deep transfer learning on thoracic CT in COVID-19 patients treated with steroids.

Jordan D Fuhrman1, Jun Chen2, Zegang Dong3, Fleming Y M Lure3, Zhe Luo4,5, Maryellen L Giger1.   

Abstract

Purpose: Given the recent COVID-19 pandemic and its stress on global medical resources, presented here is the development of a machine intelligent method for thoracic computed tomography (CT) to inform management of patients on steroid treatment. Approach: Transfer learning has demonstrated strong performance when applied to medical imaging, particularly when only limited data are available. A cascaded transfer learning approach extracted quantitative features from thoracic CT sections using a fine-tuned VGG19 network. The extracted slice features were axially pooled to provide a CT-scan-level representation of thoracic characteristics and a support vector machine was trained to distinguish between patients who required steroid administration and those who did not, with performance evaluated through receiver operating characteristic (ROC) curve analysis. Least-squares fitting was used to assess temporal trends using the transfer learning approach, providing a preliminary method for monitoring disease progression.
Results: In the task of identifying patients who should receive steroid treatments, this approach yielded an area under the ROC curve of 0.85 ± 0.10 and demonstrated significant separation between patients who received steroids and those who did not. Furthermore, temporal trend analysis of the prediction score matched expected progression during hospitalization for both groups, with separation at early timepoints prior to convergence near the end of the duration of hospitalization. Conclusions: The proposed cascade deep learning method has strong clinical potential for informing clinical decision-making and monitoring patient treatment.
© 2020 The Authors.

Entities:  

Keywords:  computed tomography; coronavirus disease-19; deep learning; methylprednisolone; transfer learning

Year:  2020        PMID: 33415179      PMCID: PMC7773028          DOI: 10.1117/1.JMI.8.S1.014501

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  16 in total

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Journal:  Med Image Anal       Date:  2017-07-26       Impact factor: 8.545

Review 3.  Machine Learning in Medical Imaging.

Authors:  Maryellen L Giger
Journal:  J Am Coll Radiol       Date:  2018-02-02       Impact factor: 5.532

4.  The meaning and use of the area under a receiver operating characteristic (ROC) curve.

Authors:  J A Hanley; B J McNeil
Journal:  Radiology       Date:  1982-04       Impact factor: 11.105

5.  A deep feature fusion methodology for breast cancer diagnosis demonstrated on three imaging modality datasets.

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6.  A prediction rule to identify low-risk patients with community-acquired pneumonia.

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7.  Association Between Administration of Systemic Corticosteroids and Mortality Among Critically Ill Patients With COVID-19: A Meta-analysis.

Authors:  Jonathan A C Sterne; Srinivas Murthy; Janet V Diaz; Arthur S Slutsky; Jesús Villar; Derek C Angus; Djillali Annane; Luciano Cesar Pontes Azevedo; Otavio Berwanger; Alexandre B Cavalcanti; Pierre-Francois Dequin; Bin Du; Jonathan Emberson; David Fisher; Bruno Giraudeau; Anthony C Gordon; Anders Granholm; Cameron Green; Richard Haynes; Nicholas Heming; Julian P T Higgins; Peter Horby; Peter Jüni; Martin J Landray; Amelie Le Gouge; Marie Leclerc; Wei Shen Lim; Flávia R Machado; Colin McArthur; Ferhat Meziani; Morten Hylander Møller; Anders Perner; Marie Warrer Petersen; Jelena Savovic; Bruno Tomazini; Viviane C Veiga; Steve Webb; John C Marshall
Journal:  JAMA       Date:  2020-10-06       Impact factor: 56.272

8.  Risk Factors Associated With Acute Respiratory Distress Syndrome and Death in Patients With Coronavirus Disease 2019 Pneumonia in Wuhan, China.

Authors:  Chaomin Wu; Xiaoyan Chen; Yanping Cai; Jia'an Xia; Xing Zhou; Sha Xu; Hanping Huang; Li Zhang; Xia Zhou; Chunling Du; Yuye Zhang; Juan Song; Sijiao Wang; Yencheng Chao; Zeyong Yang; Jie Xu; Xin Zhou; Dechang Chen; Weining Xiong; Lei Xu; Feng Zhou; Jinjun Jiang; Chunxue Bai; Junhua Zheng; Yuanlin Song
Journal:  JAMA Intern Med       Date:  2020-07-01       Impact factor: 21.873

9.  Correlation of Chest CT and RT-PCR Testing for Coronavirus Disease 2019 (COVID-19) in China: A Report of 1014 Cases.

Authors:  Tao Ai; Zhenlu Yang; Hongyan Hou; Chenao Zhan; Chong Chen; Wenzhi Lv; Qian Tao; Ziyong Sun; Liming Xia
Journal:  Radiology       Date:  2020-02-26       Impact factor: 11.105

10.  Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study.

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Journal:  Lancet       Date:  2020-03-11       Impact factor: 79.321

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  3 in total

1.  Usage of compromised lung volume in monitoring steroid therapy on severe COVID-19.

Authors:  Ying Su; Ze-Song Qiu; Jun Chen; Min-Jie Ju; Guo-Guang Ma; Jin-Wei He; Shen-Ji Yu; Kai Liu; Fleming Y M Lure; Guo-Wei Tu; Yu-Yao Zhang; Zhe Luo
Journal:  Respir Res       Date:  2022-04-29

Review 2.  Lessons learned in transitioning to AI in the medical imaging of COVID-19.

Authors:  Issam El Naqa; Hui Li; Jordan Fuhrman; Qiyuan Hu; Naveena Gorre; Weijie Chen; Maryellen L Giger
Journal:  J Med Imaging (Bellingham)       Date:  2021-10-01

3.  Augmentation of literature review of COVID-19 radiology.

Authors:  Suleman Adam Merchant; Prakash Nadkarni; Mohd Javed Saifullah Shaikh
Journal:  World J Radiol       Date:  2022-09-28
  3 in total

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