Literature DB >> 33414568

Remote sensing of solar-induced chlorophyll fluorescence (SIF) in vegetation: 50 years of progress.

Gina H Mohammed1, Roberto Colombo2, Elizabeth M Middleton3, Uwe Rascher4, Christiaan van der Tol5, Ladislav Nedbal4, Yves Goulas6, Oscar Pérez-Priego7, Alexander Damm8,9, Michele Meroni10, Joanna Joiner3, Sergio Cogliati2, Wouter Verhoef5, Zbyněk Malenovský11, Jean-Philippe Gastellu-Etchegorry12, John R Miller13, Luis Guanter14, Jose Moreno15, Ismael Moya6, Joseph A Berry16, Christian Frankenberg17, Pablo J Zarco-Tejada10,18,19,20.   

Abstract

Remote sensing of solar-induced chlorophyll fluorescence (SIF) is a rapidly advancing front in terrestrial vegetation science, with emerging capability in space-based methodologies and diverse application prospects. Although remote sensing of SIF - especially from space - is seen as a contemporary new specialty for terrestrial plants, it is founded upon a multi-decadal history of research, applications, and sensor developments in active and passive sensing of chlorophyll fluorescence. Current technical capabilities allow SIF to be measured across a range of biological, spatial, and temporal scales. As an optical signal, SIF may be assessed remotely using highly-resolved spectral sensors and state-of-the-art algorithms to distinguish the emission from reflected and/or scattered ambient light. Because the red to far-red SIF emission is detectable non-invasively, it may be sampled repeatedly to acquire spatio-temporally explicit information about photosynthetic light responses and steady-state behaviour in vegetation. Progress in this field is accelerating with innovative sensor developments, retrieval methods, and modelling advances. This review distills the historical and current developments spanning the last several decades. It highlights SIF heritage and complementarity within the broader field of fluorescence science, the maturation of physiological and radiative transfer modelling, SIF signal retrieval strategies, techniques for field and airborne sensing, advances in satellite-based systems, and applications of these capabilities in evaluation of photosynthesis and stress effects. Progress, challenges, and future directions are considered for this unique avenue of remote sensing.

Entities:  

Keywords:  (1) Sun-induced fluorescence; (10) Passive techniques; (11) Review; (2) Steady-state photosynthesis; (3) Stress detection; (4) Radiative transfer modelling; (5) SIF retrieval methods; (6) Satellite sensors; (7) Airborne instruments; (8) Applications; (9) Terrestrial vegetation

Year:  2019        PMID: 33414568      PMCID: PMC7787158          DOI: 10.1016/j.rse.2019.04.030

Source DB:  PubMed          Journal:  Remote Sens Environ        ISSN: 0034-4257            Impact factor:   10.164


  115 in total

1.  Angle matters: Bidirectional effects impact the slope of relationship between gross primary productivity and sun-induced chlorophyll fluorescence from Orbiting Carbon Observatory-2 across biomes.

Authors:  Zhaoying Zhang; Yongguang Zhang; Joanna Joiner; Mirco Migliavacca
Journal:  Glob Chang Biol       Date:  2018-09-14       Impact factor: 10.863

2.  The use of chlorophyll fluorescence nomenclature in plant stress physiology.

Authors:  O van Kooten; J F Snel
Journal:  Photosynth Res       Date:  1990-09       Impact factor: 3.573

3.  Continuous recording of photochemical and non-photochemical chlorophyll fluorescence quenching with a new type of modulation fluorometer.

Authors:  U Schreiber; U Schliwa; W Bilger
Journal:  Photosynth Res       Date:  1986-01       Impact factor: 3.573

4.  Opportunities and challenges of applications of satellite-derived sun-induced fluorescence at relatively high spatial resolution.

Authors:  Xinchen Lu; Xiao Cheng; Xianglan Li; Jianwu Tang
Journal:  Sci Total Environ       Date:  2017-11-29       Impact factor: 7.963

5.  Water, Energy, and Carbon with Artificial Neural Networks (WECANN): A statistically-based estimate of global surface turbulent fluxes and gross primary productivity using solar-induced fluorescence.

Authors:  Seyed Hamed Alemohammad; Bin Fang; Alexandra G Konings; Filipe Aires; Julia K Green; Jana Kolassa; Diego Miralles; Catherine Prigent; Pierre Gentine
Journal:  Biogeosciences       Date:  2017-09-20       Impact factor: 4.295

6.  Satellite chlorophyll fluorescence measurements reveal large-scale decoupling of photosynthesis and greenness dynamics in boreal evergreen forests.

Authors:  Sophia Walther; Maximilian Voigt; Tea Thum; Alemu Gonsamo; Yongguang Zhang; Philipp Köhler; Martin Jung; Andrej Varlagin; Luis Guanter
Journal:  Glob Chang Biol       Date:  2016-06-14       Impact factor: 10.863

7.  On the origin of a slowly reversible fluorescence decay component in the Arabidopsis npq4 mutant.

Authors:  Luca Dall'Osto; Stefano Cazzaniga; Masamitsu Wada; Roberto Bassi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-03-03       Impact factor: 6.237

8.  Amazon drought and forest response: Largely reduced forest photosynthesis but slightly increased canopy greenness during the extreme drought of 2015/2016.

Authors:  Jia Yang; Hanqin Tian; Shufen Pan; Guangsheng Chen; Bowen Zhang; Shree Dangal
Journal:  Glob Chang Biol       Date:  2018-02-19       Impact factor: 10.863

9.  Global retrievals of solar induced chlorophyll fluorescence with TROPOMI: first results and inter-sensor comparison to OCO-2.

Authors:  Philipp Köehler; Christian Frankenberg; Troy S Magney; Luis Guanter; Joanna Joiner; Jochen Landgraf
Journal:  Geophys Res Lett       Date:  2018-10-02       Impact factor: 4.720

10.  FluoSpec 2-An Automated Field Spectroscopy System to Monitor Canopy Solar-Induced Fluorescence.

Authors:  Xi Yang; Hanyu Shi; Atticus Stovall; Kaiyu Guan; Guofang Miao; Yongguang Zhang; Yao Zhang; Xiangming Xiao; Youngryel Ryu; Jung-Eun Lee
Journal:  Sensors (Basel)       Date:  2018-06-28       Impact factor: 3.847

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  20 in total

1.  Modification of a gas exchange system to measure active and passive chlorophyll fluorescence simultaneously under field conditions.

Authors:  Eliot W Meeker; Troy S Magney; Nicolas Bambach; Mina Momayyezi; Andrew J McElrone
Journal:  AoB Plants       Date:  2020-12-06       Impact factor: 3.276

2.  Quantifying Fundamental Vegetation Traits over Europe Using the Sentinel-3 OLCI Catalogue in Google Earth Engine.

Authors:  Pablo Reyes-Muñoz; Luca Pipia; Matías Salinero-Delgado; Santiago Belda; Katja Berger; José Estévez; Miguel Morata; Juan Pablo Rivera-Caicedo; Jochem Verrelst
Journal:  Remote Sens (Basel)       Date:  2022-03-10       Impact factor: 5.349

Review 3.  Machine learning methods for assessing photosynthetic activity: environmental monitoring applications.

Authors:  S S Khruschev; T Yu Plyusnina; T K Antal; S I Pogosyan; G Yu Riznichenko; A B Rubin
Journal:  Biophys Rev       Date:  2022-08-10

4.  Crop nitrogen monitoring: Recent progress and principal developments in the context of imaging spectroscopy missions.

Authors:  Katja Berger; Jochem Verrelst; Jean-Baptiste Féret; Zhihui Wang; Matthias Wocher; Markus Strathmann; Martin Danner; Wolfram Mauser; Tobias Hank
Journal:  Remote Sens Environ       Date:  2020-06       Impact factor: 13.850

5.  Quantifying vegetation biophysical variables from the Sentinel-3/FLEX tandem mission: Evaluation of the synergy of OLCI and FLORIS data sources.

Authors:  Charlotte De Grave; Jochem Verrelst; Pablo Morcillo-Pallarés; Luca Pipia; Juan Pablo Rivera-Caicedo; Eatidal Amin; Santiago Belda; José Moreno
Journal:  Remote Sens Environ       Date:  2020-12-15       Impact factor: 13.850

Review 6.  Chlorophyll a fluorescence illuminates a path connecting plant molecular biology to Earth-system science.

Authors:  Albert Porcar-Castell; Zbyněk Malenovský; Troy Magney; Shari Van Wittenberghe; Beatriz Fernández-Marín; Fabienne Maignan; Yongguang Zhang; Kadmiel Maseyk; Jon Atherton; Loren P Albert; Thomas Matthew Robson; Feng Zhao; Jose-Ignacio Garcia-Plazaola; Ingo Ensminger; Paulina A Rajewicz; Steffen Grebe; Mikko Tikkanen; James R Kellner; Janne A Ihalainen; Uwe Rascher; Barry Logan
Journal:  Nat Plants       Date:  2021-08-09       Impact factor: 15.793

7.  The role of Cytochrome b6f in the control of steady-state photosynthesis: a conceptual and quantitative model.

Authors:  J E Johnson; J A Berry
Journal:  Photosynth Res       Date:  2021-05-17       Impact factor: 3.573

Review 8.  Current and near-term advances in Earth observation for ecological applications.

Authors:  Susan L Ustin; Elizabeth M Middleton
Journal:  Ecol Process       Date:  2021-01-04

Review 9.  Advances in field-based high-throughput photosynthetic phenotyping.

Authors:  Peng Fu; Christopher M Montes; Matthew H Siebers; Nuria Gomez-Casanovas; Justin M McGrath; Elizabeth A Ainsworth; Carl J Bernacchi
Journal:  J Exp Bot       Date:  2022-05-23       Impact factor: 7.298

10.  Optimizing the Empirical Parameters of the Data-Driven Algorithm for SIF Retrieval for SIFIS Onboard TECIS-1 Satellite.

Authors:  Chu Zou; Shanshan Du; Xinjie Liu; Liangyun Liu; Yuyang Wang; Zhen Li
Journal:  Sensors (Basel)       Date:  2021-05-17       Impact factor: 3.576

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