Literature DB >> 36016907

Quantifying Fundamental Vegetation Traits over Europe Using the Sentinel-3 OLCI Catalogue in Google Earth Engine.

Pablo Reyes-Muñoz1, Luca Pipia2, Matías Salinero-Delgado1, Santiago Belda1,3, Katja Berger1,4, José Estévez1, Miguel Morata1, Juan Pablo Rivera-Caicedo5, Jochem Verrelst1.   

Abstract

Thanks to the emergence of cloud-computing platforms and the ability of machine learning methods to solve prediction problems efficiently, this work presents a workflow to automate spatiotemporal mapping of essential vegetation traits from Sentinel-3 (S3) imagery. The traits included leaf chlorophyll content (LCC), leaf area index (LAI), fraction of absorbed photosynthetically active radiation (FAPAR), and fractional vegetation cover (FVC), being fundamental for assessing photosynthetic activity on Earth. The workflow involved Gaussian process regression (GPR) algorithms trained on top-of-atmosphere (TOA) radiance simulations generated by the coupled canopy radiative transfer model (RTM) SCOPE and the atmospheric RTM 6SV. The retrieval models, named to S3-TOA-GPR-1.0, were directly implemented in Google Earth Engine (GEE) to enable the quantification of the traits from TOA data as acquired from the S3 Ocean and Land Colour Instrument (OLCI) sensor.Following good to high theoretical validation results with normalized root mean square error (NRMSE) ranging from 5% (FAPAR) to 19% (LAI), a three fold evaluation approach over diverse sites and land cover types was pursued: (1) temporal comparison against LAI and FAPAR products obtained from Moderate Resolution Imaging Spectroradiometer (MODIS) for the time window 2016-2020, (2) spatial difference mapping with Copernicus Global Land Service (CGLS) estimates, and (3) direct validation using interpolated in situ data from the VALERI network. For all three approaches, promising results were achieved. Selected sites demonstrated coherent seasonal patterns compared to LAI and FAPAR MODIS products, with differences between spatially averaged temporal patterns of only 6.59%. In respect of the spatial mapping comparison, estimates provided by the S3-TOA-GPR-1.0 models indicated highest consistency with FVC and FAPAR CGLS products. Moreover, the direct validation of our S3-TOA-GPR-1.0 models against VALERI estimates indicated with regard to jurisdictional claims in good retrieval performance for LAI, FAPAR and FVC. We conclude that our retrieval workflow of spatiotemporal S3 TOA data processing into GEE opens the path towards global monitoring of fundamental vegetation traits, accessible to the whole research community.

Entities:  

Keywords:  Gaussian process regression; Google Earth Engine; OLCI; Sentinel-3; TOA radiance; hybrid method; machine learning; time series; vegetation traits

Year:  2022        PMID: 36016907      PMCID: PMC7613398          DOI: 10.3390/rs14061347

Source DB:  PubMed          Journal:  Remote Sens (Basel)        ISSN: 2072-4292            Impact factor:   5.349


  11 in total

1.  Relationships between leaf chlorophyll content and spectral reflectance and algorithms for non-destructive chlorophyll assessment in higher plant leaves.

Authors:  Anatoly A Gitelson; Yuri Gritz; Mark N Merzlyak
Journal:  J Plant Physiol       Date:  2003-03       Impact factor: 3.549

2.  High-resolution global maps of 21st-century forest cover change.

Authors:  M C Hansen; P V Potapov; R Moore; M Hancher; S A Turubanova; A Tyukavina; D Thau; S V Stehman; S J Goetz; T R Loveland; A Kommareddy; A Egorov; L Chini; C O Justice; J R G Townshend
Journal:  Science       Date:  2013-11-15       Impact factor: 47.728

3.  Remote sensing of solar-induced chlorophyll fluorescence (SIF) in vegetation: 50 years of progress.

Authors:  Gina H Mohammed; Roberto Colombo; Elizabeth M Middleton; Uwe Rascher; Christiaan van der Tol; Ladislav Nedbal; Yves Goulas; Oscar Pérez-Priego; Alexander Damm; Michele Meroni; Joanna Joiner; Sergio Cogliati; Wouter Verhoef; Zbyněk Malenovský; Jean-Philippe Gastellu-Etchegorry; John R Miller; Luis Guanter; Jose Moreno; Ismael Moya; Joseph A Berry; Christian Frankenberg; Pablo J Zarco-Tejada
Journal:  Remote Sens Environ       Date:  2019-07-13       Impact factor: 10.164

4.  Assessing Nebraska playa wetland inundation status during 1985-2015 using Landsat data and Google Earth Engine.

Authors:  Zhenghong Tang; Yao Li; Yue Gu; Weiguo Jiang; Yuan Xue; Qiao Hu; Ted LaGrange; Andy Bishop; Jeff Drahota; Ruopu Li
Journal:  Environ Monit Assess       Date:  2016-11-08       Impact factor: 2.513

Review 5.  The common patterns of nature.

Authors:  S A Frank
Journal:  J Evol Biol       Date:  2009-06-17       Impact factor: 2.411

Review 6.  Relationship Between Remotely-sensed Vegetation Indices, Canopy Attributes and Plant Physiological Processes: What Vegetation Indices Can and Cannot Tell Us About the Landscape.

Authors:  Edward P Glenn; Alfredo R Huete; Pamela L Nagler; Stephen G Nelson
Journal:  Sensors (Basel)       Date:  2008-03-28       Impact factor: 3.576

Review 7.  Current and near-term advances in Earth observation for ecological applications.

Authors:  Susan L Ustin; Elizabeth M Middleton
Journal:  Ecol Process       Date:  2021-01-04

8.  Models of fluorescence and photosynthesis for interpreting measurements of solar-induced chlorophyll fluorescence.

Authors:  C van der Tol; J A Berry; P K E Campbell; U Rascher
Journal:  J Geophys Res Biogeosci       Date:  2014-12-26       Impact factor: 3.822

9.  Near real-time vegetation anomaly detection with MODIS NDVI: Timeliness vs. accuracy and effect of anomaly computation options.

Authors:  Michele Meroni; Dominique Fasbender; Felix Rembold; Clement Atzberger; Anja Klisch
Journal:  Remote Sens Environ       Date:  2019-02       Impact factor: 10.164

10.  Global climate and nutrient controls of photosynthetic capacity.

Authors:  Yunke Peng; Keith J Bloomfield; Lucas A Cernusak; Tomas F Domingues; I Colin Prentice
Journal:  Commun Biol       Date:  2021-04-12
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  2 in total

1.  Multi-Season Phenology Mapping of Nile Delta Croplands Using Time Series of Sentinel-2 and Landsat 8 Green LAI.

Authors:  Eatidal Amin; Santiago Belda; Luca Pipia; Zoltan Szantoi; Ahmed El Baroudy; José Moreno; Jochem Verrelst
Journal:  Remote Sens (Basel)       Date:  2022-04-09       Impact factor: 5.349

2.  Seasonal Mapping of Irrigated Winter Wheat Traits in Argentina with a Hybrid Retrieval Workflow Using Sentinel-2 Imagery.

Authors:  Gabriel Caballero; Alejandro Pezzola; Cristina Winschel; Alejandra Casella; Paolo Sanchez Angonova; Juan Pablo Rivera-Caicedo; Katja Berger; Jochem Verrelst; Jesus Delegido
Journal:  Remote Sens (Basel)       Date:  2022-09-10       Impact factor: 5.349

  2 in total

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