Modification of a gas exchange system to measure active and passive chlorophyll fluorescence simultaneously under field conditions.

Solar-induced fluorescence (SIF) is a promising tool to estimate photosynthesis across scales; however, there has been limited research done at the leaf level to investigate the relationship between SIF and photosynthesis. To help bridge this gap, a LI-COR LI-6800 gas exchange instrument was modified with a visible-near-infrared (VIS-NIR) spectrometer to measure active and passive fluorescence simultaneously. The system was adapted by drilling a hole into the bottom plate of the leaf chamber and inserting a fibre-optic to measure passive steady-state fluorescence (F t , λ , analogous to SIF) from the abaxial surface of a leaf. This new modification can concurrently measure gas exchange, passive fluorescence and active fluorescence over the same leaf area and will allow researchers to measure leaf-level F t , λ in the field to validate tower-based and satellite measurements. To test the modified instrument, measurements were performed on leaves of well-watered and water-stressed walnut plants at three light levels and a constant air temperature. Measurements on these same plants were also conducted using a similarly modified Walz GFS-3000 gas exchange instrument to compare results. We found a positive linear correlation between F t , λ measurements from the modified LI-6800 and GFS-3000 instruments. We also report a positive linear relationship between F t , λ and normalized steady-state chlorophyll fluorescence (F t /F o ) from the pulse-amplitude modulation (PAM) fluorometer of the LI-6800 system. Accordingly, this modification will inform the link between spectrally resolved F t , λ and gas exchange-leading to improved interpretation of how remotely sensed SIF tracks changes in the light reactions of photosynthesis. Published by Oxford University Press on behalf of the Annals of Botany Company 2020.