Literature DB >> 33411771

Performance improvement of machine learning techniques predicting the association of exacerbation of peak expiratory flow ratio with short term exposure level to indoor air quality using adult asthmatics clustered data.

Wan D Bae1, Sungroul Kim2, Choon-Sik Park3, Shayma Alkobaisi4, Jongwon Lee5, Wonseok Seo1, Jong Sook Park3, Sujung Park2, Sangwoon Lee2, Jong Wook Lee3.   

Abstract

Large-scale data sources, remote sensing technologies, and superior computing power have tremendously benefitted to environmental health study. Recently, various machine-learning algorithms were introduced to provide mechanistic insights about the heterogeneity of clustered data pertaining to the symptoms of each asthma patient and potential environmental risk factors. However, there is limited information on the performance of these machine learning tools. In this study, we compared the performance of ten machine-learning techniques. Using an advanced method of imbalanced sampling (IS), we improved the performance of nine conventional machine learning techniques predicting the association between exposure level to indoor air quality and change in patients' peak expiratory flow rate (PEFR). We then proposed a deep learning method of transfer learning (TL) for further improvement in prediction accuracy. Our selected final prediction techniques (TL1_IS or TL2-IS) achieved a balanced accuracy median (interquartile range) of 66(56~76) % for TL1_IS and 68(63~78) % for TL2_IS. Precision levels for TL1_IS and TL2_IS were 68(62~72) % and 66(62~69) % while sensitivity levels were 58(50~67) % and 59(51~80) % from 25 patients which were approximately 1.08 (accuracy, precision) to 1.28 (sensitivity) times increased in terms of performance outcomes, compared to NN_IS. Our results indicate that the transfer machine learning technique with imbalanced sampling is a powerful tool to predict the change in PEFR due to exposure to indoor air including the concentration of particulate matter of 2.5 μm and carbon dioxide. This modeling technique is even applicable with small-sized or imbalanced dataset, which represents a personalized, real-world setting.

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Year:  2021        PMID: 33411771      PMCID: PMC7790419          DOI: 10.1371/journal.pone.0244233

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  15 in total

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Journal:  Pediatrics       Date:  2000-05       Impact factor: 7.124

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Journal:  Curr Opin Pulm Med       Date:  2012-01       Impact factor: 3.155

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Journal:  Comput Methods Programs Biomed       Date:  2010-05-31       Impact factor: 5.428

Review 8.  Epidemiology and economic burden of asthma.

Authors:  Patricia A Loftus; Sarah K Wise
Journal:  Int Forum Allergy Rhinol       Date:  2015-05-23       Impact factor: 3.858

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Review 10.  Asthma costs and social impact.

Authors:  Carlos Nunes; Ana Margarida Pereira; Mário Morais-Almeida
Journal:  Asthma Res Pract       Date:  2017-01-06
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  1 in total

1.  A Framework for Augmented Intelligence in Allergy and Immunology Practice and Research-A Work Group Report of the AAAAI Health Informatics, Technology, and Education Committee.

Authors:  Paneez Khoury; Renganathan Srinivasan; Sujani Kakumanu; Sebastian Ochoa; Anjeni Keswani; Rachel Sparks; Nicholas L Rider
Journal:  J Allergy Clin Immunol Pract       Date:  2022-03-15
  1 in total

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