Literature DB >> 33395940

EFSA's OpenFoodTox: An open source toxicological database on chemicals in food and feed and its future developments.

J L C M Dorne1, J Richardson2, A Livaniou2, E Carnesecchi3, L Ceriani4, R Baldin4, S Kovarich4, M Pavan4, E Saouter5, F Biganzoli5, L Pasinato2, M Zare Jeddi6, T P Robinson2, G E N Kass2, A K D Liem2, A A Toropov7, A P Toropova7, C Yang8, A Tarkhov8, N Georgiadis9, M R Di Nicola10, A Mostrag8, H Verhagen11, A Roncaglioni7, E Benfenati7, A Bassan12.   

Abstract

Since its creation in 2002, the European Food Safety Authority (EFSA) has produced risk assessments for over 5000 substances in >2000 Scientific Opinions, Statements and Conclusions through the work of its Scientific Panels, Units and Scientific Committee. OpenFoodTox is an open source toxicological database, available both for download and data visualisation which provides data for all substances evaluated by EFSA including substance characterisation, links to EFSA's outputs, applicable legislations regulations, and a summary of hazard identification and hazard characterisation data for human health, animal health and ecological assessments. The database has been structured using OECD harmonised templates for reporting chemical test summaries (OHTs) to facilitate data sharing with stakeholders with an interest in chemical risk assessment, such as sister agencies, international scientific advisory bodies, and others. This manuscript provides a description of OpenFoodTox including data model, content and tools to download and search the database. Examples of applications of OpenFoodTox in chemical risk assessment are discussed including new quantitative structure-activity relationship (QSAR) models, integration into tools (OECD QSAR Toolbox and AMBIT-2.0), assessment of environmental footprints and testing of threshold of toxicological concern (TTC) values for food related compounds. Finally, future developments for OpenFoodTox 2.0 include the integration of new properties, such as physico-chemical properties, exposure data, toxicokinetic information; and the future integration within in silico modelling platforms such as QSAR models and physiologically-based kinetic models. Such structured in vivo, in vitro and in silico hazard data provide different lines of evidence which can be assembled, weighed and integrated using harmonised Weight of Evidence approaches to support the use of New Approach Methodologies (NAMs) in chemical risk assessment and the reduction of animal testing.
Copyright © 2020 The Authors. Published by Elsevier Ltd.. All rights reserved.

Entities:  

Keywords:  Ecotoxicology; Hazard assessment; In silico models; OpenFoodTox; Risk assessment; Toxicology

Year:  2020        PMID: 33395940     DOI: 10.1016/j.envint.2020.106293

Source DB:  PubMed          Journal:  Environ Int        ISSN: 0160-4120            Impact factor:   9.621


  7 in total

1.  In Silico Models for Repeated-Dose Toxicity (RDT): Prediction of the No Observed Adverse Effect Level (NOAEL) and Lowest Observed Adverse Effect Level (LOAEL) for Drugs.

Authors:  Fabiola Pizzo; Domenico Gadaleta; Emilio Benfenati
Journal:  Methods Mol Biol       Date:  2022

2.  In Silico Methods for Environmental Risk Assessment: Principles, Tiered Approaches, Applications, and Future Perspectives.

Authors:  Maria Chiara Astuto; Matteo R Di Nicola; José V Tarazona; A Rortais; Yann Devos; A K Djien Liem; George E N Kass; Maria Bastaki; Reinhilde Schoonjans; Angelo Maggiore; Sandrine Charles; Aude Ratier; Christelle Lopes; Ophelia Gestin; Tobin Robinson; Antony Williams; Nynke Kramer; Edoardo Carnesecchi; Jean-Lou C M Dorne
Journal:  Methods Mol Biol       Date:  2022

3.  Scientific Opinion of the Scientific Panel on Plant Protection Products and their Residues (PPR Panel) on testing and interpretation of comparative in vitro metabolism studies.

Authors:  Antonio F Hernandez-Jerez; Paulien Adriaanse; Annette Aldrich; Philippe Berny; Tamara Coja; Sabine Duquesne; Andreas Focks; Marina Marinovich; Maurice Millet; Olavi Pelkonen; Silvia Pieper; Aaldrik Tiktak; Christopher J Topping; Anneli Widenfalk; Martin Wilks; Gerrit Wolterink; Ursula Gundert-Remy; Jochem Louisse; Serge Rudaz; Emanuela Testai; Alfonso Lostia; Jean-Lou Dorne; Juan Manuel Parra Morte
Journal:  EFSA J       Date:  2021-12-23

4.  Current status and future directions for a neurotoxicity hazard assessment framework that integrates in silico approaches.

Authors:  Kevin M Crofton; Arianna Bassan; Mamta Behl; Yaroslav G Chushak; Ellen Fritsche; Jeffery M Gearhart; Mary Sue Marty; Moiz Mumtaz; Manuela Pavan; Patricia Ruiz; Magdalini Sachana; Rajamani Selvam; Timothy J Shafer; Lidiya Stavitskaya; David T Szabo; Steven T Szabo; Raymond R Tice; Dan Wilson; David Woolley; Glenn J Myatt
Journal:  Comput Toxicol       Date:  2022-03-17

5.  Monte Carlo Models for Sub-Chronic Repeated-Dose Toxicity: Systemic and Organ-Specific Toxicity.

Authors:  Gianluca Selvestrel; Giovanna J Lavado; Alla P Toropova; Andrey A Toropov; Domenico Gadaleta; Marco Marzo; Diego Baderna; Emilio Benfenati
Journal:  Int J Mol Sci       Date:  2022-06-14       Impact factor: 6.208

6.  Identification and prioritisation for risk assessment of phthalates, structurally similar substances and replacement substances potentially used as plasticisers in materials and articles intended to come into contact with food.

Authors:  Claude Lambré; José Manuel Barat Baviera; Claudia Bolognesi; Andrew Chesson; Pier Sandro Cocconcelli; Riccardo Crebelli; David Michael Gott; Konrad Grob; Evgenia Lampi; Marcel Mengelers; Alicja Mortensen; Gilles Rivière; Inger-Lise Steffensen; Christina Tlustos; Henk Van Loveren; Laurence Vernis; Holger Zorn; Birgit Ahrens; Evelin Fabjan; Ronan Nicolas; Letizia Polci; Katleen Baert; Katharina Volk; Laurence Castle
Journal:  EFSA J       Date:  2022-05-12

7.  Defining the Human-Biota Thresholds of Toxicological Concern for Organic Chemicals in Freshwater: The Proposed Strategy of the LIFE VERMEER Project Using VEGA Tools.

Authors:  Diego Baderna; Roberta Faoro; Gianluca Selvestrel; Adrien Troise; Davide Luciani; Sandrine Andres; Emilio Benfenati
Journal:  Molecules       Date:  2021-03-30       Impact factor: 4.411

  7 in total

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