Literature DB >> 33383334

An interpretable classifier for high-resolution breast cancer screening images utilizing weakly supervised localization.

Yiqiu Shen1, Nan Wu1, Jason Phang1, Jungkyu Park2, Kangning Liu1, Sudarshini Tyagi3, Laura Heacock4, S Gene Kim5, Linda Moy5, Kyunghyun Cho6, Krzysztof J Geras7.   

Abstract

Medical images differ from natural images in significantly higher resolutions and smaller regions of interest. Because of these differences, neural network architectures that work well for natural images might not be applicable to medical image analysis. In this work, we propose a novel neural network model to address these unique properties of medical images. This model first uses a low-capacity, yet memory-efficient, network on the whole image to identify the most informative regions. It then applies another higher-capacity network to collect details from chosen regions. Finally, it employs a fusion module that aggregates global and local information to make a prediction. While existing methods often require lesion segmentation during training, our model is trained with only image-level labels and can generate pixel-level saliency maps indicating possible malignant findings. We apply the model to screening mammography interpretation: predicting the presence or absence of benign and malignant lesions. On the NYU Breast Cancer Screening Dataset, our model outperforms (AUC = 0.93) ResNet-34 and Faster R-CNN in classifying breasts with malignant findings. On the CBIS-DDSM dataset, our model achieves performance (AUC = 0.858) on par with state-of-the-art approaches. Compared to ResNet-34, our model is 4.1x faster for inference while using 78.4% less GPU memory. Furthermore, we demonstrate, in a reader study, that our model surpasses radiologist-level AUC by a margin of 0.11.
Copyright © 2020. Published by Elsevier B.V.

Entities:  

Keywords:  Breast cancer screening; Deep learning; High-resolution image classification; Weakly supervised localization

Mesh:

Year:  2020        PMID: 33383334      PMCID: PMC7828643          DOI: 10.1016/j.media.2020.101908

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  35 in total

1.  False-positive reduction in CAD mass detection using a competitive classification strategy.

Authors:  L Li; Y Zheng; L Zhang; R A Clark
Journal:  Med Phys       Date:  2001-02       Impact factor: 4.071

2.  Bilateral analysis based false positive reduction for computer-aided mass detection.

Authors:  Yi-Ta Wu; Jun Wei; Lubomir M Hadjiiski; Berkman Sahiner; Chuan Zhou; Jun Ge; Jiazheng Shi; Yiheng Zhang; Heang-Ping Chan
Journal:  Med Phys       Date:  2007-08       Impact factor: 4.071

3.  Computer-aided mass detection in mammography: false positive reduction via gray-scale invariant ranklet texture features.

Authors:  Matteo Masotti; Nico Lanconelli; Renato Campanini
Journal:  Med Phys       Date:  2009-02       Impact factor: 4.071

4.  Discriminative Localization in CNNs for Weakly-Supervised Segmentation of Pulmonary Nodules.

Authors:  Xinyang Feng; Jie Yang; Andrew F Laine; Elsa D Angelini
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

Review 5.  Deep learning.

Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

6.  Classifying symmetrical differences and temporal change for the detection of malignant masses in mammography using deep neural networks.

Authors:  Thijs Kooi; Nico Karssemeijer
Journal:  J Med Imaging (Bellingham)       Date:  2017-10-10

7.  Breast cancer statistics, 2017, racial disparity in mortality by state.

Authors:  Carol E DeSantis; Jiemin Ma; Ann Goding Sauer; Lisa A Newman; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2017-10-03       Impact factor: 508.702

8.  A curated mammography data set for use in computer-aided detection and diagnosis research.

Authors:  Rebecca Sawyer Lee; Francisco Gimenez; Assaf Hoogi; Kanae Kawai Miyake; Mia Gorovoy; Daniel L Rubin
Journal:  Sci Data       Date:  2017-12-19       Impact factor: 6.444

9.  Applying Data-driven Imaging Biomarker in Mammography for Breast Cancer Screening: Preliminary Study.

Authors:  Eun-Kyung Kim; Hyo-Eun Kim; Kyunghwa Han; Bong Joo Kang; Yu-Mee Sohn; Ok Hee Woo; Chan Wha Lee
Journal:  Sci Rep       Date:  2018-02-09       Impact factor: 4.379

10.  International evaluation of an AI system for breast cancer screening.

Authors:  Scott Mayer McKinney; Marcin Sieniek; Varun Godbole; Jonathan Godwin; Natasha Antropova; Hutan Ashrafian; Trevor Back; Mary Chesus; Greg S Corrado; Ara Darzi; Mozziyar Etemadi; Florencia Garcia-Vicente; Fiona J Gilbert; Mark Halling-Brown; Demis Hassabis; Sunny Jansen; Alan Karthikesalingam; Christopher J Kelly; Dominic King; Joseph R Ledsam; David Melnick; Hormuz Mostofi; Lily Peng; Joshua Jay Reicher; Bernardino Romera-Paredes; Richard Sidebottom; Mustafa Suleyman; Daniel Tse; Kenneth C Young; Jeffrey De Fauw; Shravya Shetty
Journal:  Nature       Date:  2020-01-01       Impact factor: 49.962

View more
  10 in total

Review 1.  Deep Learning Approaches for Automatic Localization in Medical Images.

Authors:  H Alaskar; A Hussain; B Almaslukh; T Vaiyapuri; Z Sbai; Arun Kumar Dubey
Journal:  Comput Intell Neurosci       Date:  2022-06-29

2.  Weakly-supervised High-resolution Segmentation of Mammography Images for Breast Cancer Diagnosis.

Authors:  Carlos Fernandez-Granda; Krzysztof J Geras; Kangning Liu; Yiqiu Shen; Nan Wu; Jakub Chłędowski
Journal:  Proc Mach Learn Res       Date:  2021-07

Review 3.  Clinical Artificial Intelligence Applications: Breast Imaging.

Authors:  Qiyuan Hu; Maryellen L Giger
Journal:  Radiol Clin North Am       Date:  2021-11       Impact factor: 1.947

4.  BI-RADS-NET: AN EXPLAINABLE MULTITASK LEARNING APPROACH FOR CANCER DIAGNOSIS IN BREAST ULTRASOUND IMAGES.

Authors:  Boyu Zhang; Aleksandar Vakanski; Min Xian
Journal:  IEEE Int Workshop Mach Learn Signal Process       Date:  2021-11-15

5.  Artificial intelligence system reduces false-positive findings in the interpretation of breast ultrasound exams.

Authors:  Yiqiu Shen; Farah E Shamout; Jamie R Oliver; Jan Witowski; Kawshik Kannan; Jungkyu Park; Nan Wu; Connor Huddleston; Stacey Wolfson; Alexandra Millet; Robin Ehrenpreis; Divya Awal; Cathy Tyma; Naziya Samreen; Yiming Gao; Chloe Chhor; Stacey Gandhi; Cindy Lee; Sheila Kumari-Subaiya; Cindy Leonard; Reyhan Mohammed; Christopher Moczulski; Jaime Altabet; James Babb; Alana Lewin; Beatriu Reig; Linda Moy; Laura Heacock; Krzysztof J Geras
Journal:  Nat Commun       Date:  2021-09-24       Impact factor: 17.694

6.  An artificial intelligence system for predicting the deterioration of COVID-19 patients in the emergency department.

Authors:  Farah E Shamout; Yiqiu Shen; Nan Wu; Aakash Kaku; Jungkyu Park; Taro Makino; Stanisław Jastrzębski; Jan Witowski; Duo Wang; Ben Zhang; Siddhant Dogra; Meng Cao; Narges Razavian; David Kudlowitz; Lea Azour; William Moore; Yvonne W Lui; Yindalon Aphinyanaphongs; Carlos Fernandez-Granda; Krzysztof J Geras
Journal:  NPJ Digit Med       Date:  2021-05-12

7.  Differences between human and machine perception in medical diagnosis.

Authors:  Taro Makino; Stanisław Jastrzębski; Witold Oleszkiewicz; Celin Chacko; Robin Ehrenpreis; Naziya Samreen; Chloe Chhor; Eric Kim; Jiyon Lee; Kristine Pysarenko; Beatriu Reig; Hildegard Toth; Divya Awal; Linda Du; Alice Kim; James Park; Daniel K Sodickson; Laura Heacock; Linda Moy; Kyunghyun Cho; Krzysztof J Geras
Journal:  Sci Rep       Date:  2022-04-27       Impact factor: 4.996

8.  A survey on the interpretability of deep learning in medical diagnosis.

Authors:  Qiaoying Teng; Zhe Liu; Yuqing Song; Kai Han; Yang Lu
Journal:  Multimed Syst       Date:  2022-06-25       Impact factor: 2.603

9.  A Machine Vision Approach for Classification of Skin Cancer Using Hybrid Texture Features.

Authors:  Syeda Shamaila Zareen; Sun Guangmin; Yu Li; Mahwish Kundi; Salman Qadri; Syed Furqan Qadri; Mubashir Ahmad; Ali Haider Khan
Journal:  Comput Intell Neurosci       Date:  2022-07-18

10.  Improving the Ability of Deep Neural Networks to Use Information from Multiple Views in Breast Cancer Screening.

Authors:  Nan Wu; Stanisław Jastrzębski; Jungkyu Park; Linda Moy; Kyunghyun Cho; Krzysztof J Geras
Journal:  Proc Mach Learn Res       Date:  2020-07
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.