Literature DB >> 333400

Bacteriophage T4 RNA ligase: preparation of a physically homogeneous, nuclease-free enzyme from hyperproducing infected cells.

N P Higgins, A P Geballe, T J Snopek, A Sugino, N R Cozzarelli.   

Abstract

Infection of Escherichia coli by a bacteriophage T4 regA, gene 44 double mutant leads to about a 7-fold increase in the amount of RNA ligase obtained after infection by wild-type phage. Using cells infected by the double mutant, RNA ligase was purified to homogeneity with a 20% yield. Unlike previous preparations of this enzyme, the ligase is free of contaminating nuclease and is therefore suitable for intermolecular ligation of DNA substrates. In the course of these studies it was discovered that adenylalation of the enzyme--a step in the reaction pathway--markedly decreased the electrophoretic mobility of RNA ligase through polyacrylamide gels containing sodium dodecyl sulfate. This behavior allows identification of RNA ligase among a mixture of proteins and was used to demonstrate that virtually all of the purified protein is enzymatically active.

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Year:  1977        PMID: 333400      PMCID: PMC342642          DOI: 10.1093/nar/4.9.3175

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  Equimolar addition of oligoribonucleotides with T4 RNA ligase.

Authors:  O C Uhlenbeck; V Cameron
Journal:  Nucleic Acids Res       Date:  1977-01       Impact factor: 16.971

2.  Synthetic lac operator DNA is functional in vivo.

Authors:  H L Heyneker; J Shine; H M Goodman; H W Boyer; J Rosenberg; R E Dickerson; S A Narang; K Itakura; S Lin; A D Riggs
Journal:  Nature       Date:  1976-10-28       Impact factor: 49.962

3.  Construction of plasmids carrying the cI gene of bacteriophage lambda.

Authors:  K Backman; M Ptashne; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

4.  Studies on ribonucleic acid ligase. Characterization of an adenosine triphosphate-inorganic pyrophosphate exchange reaction and demonstration of an enzyme-adenylate complex with T4 bacteriophage-induced enzyme.

Authors:  J W Cranston; R Silber; V G Malathi; J Hurwitz
Journal:  J Biol Chem       Date:  1974-12-10       Impact factor: 5.157

Review 5.  DNA ligase: structure, mechanism, and function.

Authors:  I R Lehman
Journal:  Science       Date:  1974-11-29       Impact factor: 47.728

6.  Cloned synthetic lac operator DNA is biologically active.

Authors:  K J Marians; R Wu; J Stawinski; T Hozumi; S A Narang
Journal:  Nature       Date:  1976-10-28       Impact factor: 49.962

7.  Interaction of bacteriophage T4 RNA and DNA ligases in joining of duplex DNA at base-paired ends.

Authors:  A Sugino; H M Goodman; H L Heyneker; J Shine; H W Boyer; N R Cozzarelli
Journal:  J Biol Chem       Date:  1977-06-10       Impact factor: 5.157

8.  The use of terminal blocking groups for the specific joining of oligonucleotides in RNA ligase reactions containing equimolar concentrations of acceptor and donor molecules.

Authors:  J J Sninsky; J A Last; P T Gilham
Journal:  Nucleic Acids Res       Date:  1976-11       Impact factor: 16.971

9.  Purification and properties of bacteriophage T4-induced RNA ligase.

Authors:  R Silber; V G Malathi; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1972-10       Impact factor: 11.205

10.  Bacteriophage T4 RNA ligase. Reaction intermediates and interaction of substrates.

Authors:  A Sugino; T J Snoper; N R Cozzarelli
Journal:  J Biol Chem       Date:  1977-03-10       Impact factor: 5.157

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  9 in total

1.  Purification of the gam gene-product of bacteriophage Mu and determination of the nucleotide sequence of the gam gene.

Authors:  J E Akroyd; E Clayson; N P Higgins
Journal:  Nucleic Acids Res       Date:  1986-09-11       Impact factor: 16.971

2.  Addition of oligonucleotides to the 5'-terminus of DNA by T4 RNA ligase.

Authors:  N P Higgins; A P Geballe; N R Cozzarelli
Journal:  Nucleic Acids Res       Date:  1979-03       Impact factor: 16.971

3.  regA protein of bacteriophage T4D: identification, schedule of synthesis, and autogenous regulation.

Authors:  T S Cardillo; E F Landry; J S Wiberg
Journal:  J Virol       Date:  1979-12       Impact factor: 5.103

4.  Modeling bias and variation in the stochastic processes of small RNA sequencing.

Authors:  Christos Argyropoulos; Alton Etheridge; Nikita Sakhanenko; David Galas
Journal:  Nucleic Acids Res       Date:  2017-06-20       Impact factor: 16.971

5.  Base substitutions in the wobble position of the anticodon inhibit aminoacylation of E. coli tRNAfMet by E. coli Met-tRNA synthetase.

Authors:  L H Schulman; H Pelka; M Susani
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

6.  Anticodon loop size and sequence requirements for recognition of formylmethionine tRNA by methionyl-tRNA synthetase.

Authors:  L H Schulman; H Pelka
Journal:  Proc Natl Acad Sci U S A       Date:  1983-11       Impact factor: 11.205

7.  Translational regulation: identification of the site on bacteriophage T4 rIIB mRNA recognized by the regA gene function.

Authors:  J Karam; L Gold; B S Singer; M Dawson
Journal:  Proc Natl Acad Sci U S A       Date:  1981-08       Impact factor: 11.205

8.  Sequence and cloning of bacteriophage T4 gene 63 encoding RNA ligase and tail fibre attachment activities.

Authors:  K N Rand; M J Gait
Journal:  EMBO J       Date:  1984-02       Impact factor: 11.598

Review 9.  Biases in small RNA deep sequencing data.

Authors:  Carsten A Raabe; Thean-Hock Tang; Juergen Brosius; Timofey S Rozhdestvensky
Journal:  Nucleic Acids Res       Date:  2013-11-05       Impact factor: 16.971

  9 in total

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