Literature DB >> 33330932

DNA damage alters nuclear mechanics through chromatin reorganization.

Ália Dos Santos1, Alexander W Cook1, Rosemarie E Gough1, Martin Schilling2, Nora A Olszok2, Ian Brown3, Lin Wang4, Jesse Aaron5, Marisa L Martin-Fernandez4, Florian Rehfeldt2,6, Christopher P Toseland1.   

Abstract

DNA double-strand breaks drive genomic instability. However, it remains unknown how these processes may affect the biomechanical properties of the nucleus and what role nuclear mechanics play in DNA damage and repair efficiency. Here, we have used Atomic Force Microscopy to investigate nuclear mechanical changes, arising from externally induced DNA damage. We found that nuclear stiffness is significantly reduced after cisplatin treatment, as a consequence of DNA damage signalling. This softening was linked to global chromatin decondensation, which improves molecular diffusion within the organelle. We propose that this can increase recruitment for repair factors. Interestingly, we also found that reduction of nuclear tension, through cytoskeletal relaxation, has a protective role to the cell and reduces accumulation of DNA damage. Overall, these changes protect against further genomic instability and promote DNA repair. We propose that these processes may underpin the development of drug resistance.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

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Year:  2021        PMID: 33330932      PMCID: PMC7797048          DOI: 10.1093/nar/gkaa1202

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  61 in total

1.  Distinct roles for the RSC and Swi/Snf ATP-dependent chromatin remodelers in DNA double-strand break repair.

Authors:  Bob Chai; Jian Huang; Bradley R Cairns; Brehon C Laurent
Journal:  Genes Dev       Date:  2005-07-15       Impact factor: 11.361

Review 2.  Cell responses to the mechanochemical microenvironment--implications for regenerative medicine and drug delivery.

Authors:  Florian Rehfeldt; Adam J Engler; Adam Eckhardt; Fariyal Ahmed; Dennis E Discher
Journal:  Adv Drug Deliv Rev       Date:  2007-08-14       Impact factor: 15.470

Review 3.  Fluorescent labeling and modification of proteins.

Authors:  Christopher P Toseland
Journal:  J Chem Biol       Date:  2013-04-13

Review 4.  The roles of nuclear myosin in the DNA damage response.

Authors:  Alexander W Cook; Christopher P Toseland
Journal:  J Biochem       Date:  2021-04-18       Impact factor: 3.387

5.  Optimal matrix rigidity for stress fiber polarization in stem cells.

Authors:  A Zemel; F Rehfeldt; A E X Brown; D E Discher; S A Safran
Journal:  Nat Phys       Date:  2010-06-01       Impact factor: 20.034

Review 6.  Dynamics of DNA damage response proteins at DNA breaks: a focus on protein modifications.

Authors:  Sophie E Polo; Stephen P Jackson
Journal:  Genes Dev       Date:  2011-03-01       Impact factor: 11.361

7.  H2AX is required for cell cycle arrest via the p53/p21 pathway.

Authors:  Michalis Fragkos; Jaana Jurvansuu; Peter Beard
Journal:  Mol Cell Biol       Date:  2009-03-09       Impact factor: 4.272

8.  NDP52 activates nuclear myosin VI to enhance RNA polymerase II transcription.

Authors:  Natalia Fili; Yukti Hari-Gupta; Ália Dos Santos; Alexander Cook; Simon Poland; Simon M Ameer-Beg; Maddy Parsons; Christopher P Toseland
Journal:  Nat Commun       Date:  2017-11-30       Impact factor: 14.919

9.  Chromatin and lamin A determine two different mechanical response regimes of the cell nucleus.

Authors:  Andrew D Stephens; Edward J Banigan; Stephen A Adam; Robert D Goldman; John F Marko
Journal:  Mol Biol Cell       Date:  2017-01-05       Impact factor: 4.138

10.  Global chromatin compaction limits the strength of the DNA damage response.

Authors:  Matilde Murga; Isabel Jaco; Yuhong Fan; Rebeca Soria; Barbara Martinez-Pastor; Myriam Cuadrado; Seung-Min Yang; Maria A Blasco; Arthur I Skoultchi; Oscar Fernandez-Capetillo
Journal:  J Cell Biol       Date:  2007-09-24       Impact factor: 10.539

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  13 in total

1.  Measuring Nuclear Organization of Proteins with STORM Imaging and Cluster Analysis.

Authors:  Ália Dos Santos; Rosemarie E Gough; Lin Wang; Christopher P Toseland
Journal:  Methods Mol Biol       Date:  2022

2.  Measuring Nuclear Mechanics with Atomic Force Microscopy.

Authors:  Ália Dos Santos; Florian Rehfeldt; Christopher P Toseland
Journal:  Methods Mol Biol       Date:  2022

Review 3.  Molecular Link between DNA Damage Response and Microtubule Dynamics.

Authors:  Jung Min Kim
Journal:  Int J Mol Sci       Date:  2022-06-23       Impact factor: 6.208

4.  High-throughput mechanobiology: Force modulation of ensemble biochemical and cell-based assays.

Authors:  Ália Dos Santos; Natalia Fili; David S Pearson; Yukti Hari-Gupta; Christopher P Toseland
Journal:  Biophys J       Date:  2021-01-14       Impact factor: 4.033

5.  Combining multiple fluorescence imaging techniques in biology: when one microscope is not enough.

Authors:  Chad M Hobson; Jesse S Aaron
Journal:  Mol Biol Cell       Date:  2022-05-15       Impact factor: 3.612

6.  A Targeted and Tuneable DNA Damage Tool Using CRISPR/Cas9.

Authors:  Ioannis Emmanouilidis; Natalia Fili; Alexander W Cook; Yukti Hari-Gupta; Ália Dos Santos; Lin Wang; Marisa L Martin-Fernandez; Peter J I Ellis; Christopher P Toseland
Journal:  Biomolecules       Date:  2021-02-15

7.  A naphthalimide-based peptide conjugate for concurrent imaging and apoptosis induction in cancer cells by utilizing endogenous hydrogen sulfide.

Authors:  Narendra Singh; Swati Sharma; Ramesh Singh; Swati Rajput; Naibedya Chattopadhyay; Deepshikha Tewari; Khashti Ballabh Joshi; Sandeep Verma
Journal:  Chem Sci       Date:  2021-11-17       Impact factor: 9.825

Review 8.  A survey of physical methods for studying nuclear mechanics and mechanobiology.

Authors:  Chad M Hobson; Michael R Falvo; Richard Superfine
Journal:  APL Bioeng       Date:  2021-11-18

Review 9.  Regulation of Nuclear Mechanics and the Impact on DNA Damage.

Authors:  Ália Dos Santos; Christopher P Toseland
Journal:  Int J Mol Sci       Date:  2021-03-20       Impact factor: 5.923

10.  Nuclear Organization during Hepatogenesis in Zebrafish Requires Uhrf1.

Authors:  Bhavani P Madakashira; Chi Zhang; Filippo Macchi; Elena Magnani; Kirsten C Sadler
Journal:  Genes (Basel)       Date:  2021-07-16       Impact factor: 4.096

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