| Literature DB >> 33315952 |
Sam McKechnie1, David Fletcher2, Jamie Newman3, Corey Bragg4, Peter W Dillingham5, Rosemary Clucas6, Darren Scott7, Sebastian Uhlmann8, Phil Lyver9, Andrew Gormley9, Henrik Moller10.
Abstract
A suite of factors may have contributed to declines in the tītī (sooty shearwater; Ardenna grisea) population in the New Zealand region since at least the 1960s. Recent estimation of the magnitude of most sources of non-natural mortality has presented the opportunity to quantitatively assess the relative importance of these factors. We fit a range of population dynamics models to a time-series of relative abundance data from 1976 until 2005, with the various sources of mortality being modelled at the appropriate part of the life-cycle. We present estimates of effects obtained from the best-fitting model and using model averaging. The best-fitting models explained much of the variation in the abundance index when survival and fecundity were linked to the Southern Oscillation Index, with strong decreases in adult survival, juvenile survival and fecundity being related to El Niño-Southern Oscillation (ENSO) events. Predation by introduced animals, harvesting by humans, and bycatch in fisheries also appear to have contributed to the population decline. It is envisioned that the best-fitting models will form the basis for quantitative assessments of competing management strategies. Our analysis suggests that sustainability of the New Zealand tītī population will be most influenced by climate, in particular by how climate change will affect the frequency and intensity of ENSO events in the future. Removal of the effects of both depredation by introduced predators and harvesting by humans is likely to have fewer benefits for the population than alleviating climate effects.Entities:
Mesh:
Year: 2020 PMID: 33315952 PMCID: PMC7735597 DOI: 10.1371/journal.pone.0243794
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Overview of the tītī population model.
The 15 age classes are represented by circles and intermediate calculations (chicks not harvested, and number of adults) by rectangles. The multipliers used to determine the number of individuals progressing to the next age-class are shown in red. The notation is as in the text, except that the dependence on year is suppressed for simplicity. Likewise, age classes 4 to 12 are suppressed for ease of presentation.
Overview of how the data inform the tītī population model.
| Estimates and input variables | Population model parameters informed |
|---|---|
| Estimate (with SE) of chick abundance in 2005 ( | Chick abundance in 2005 ( |
| Estimate of trend in burrow density 1976–2005 ( | Trend in adult abundance 1976–2005 |
| CPUE in 1979–92, 1994–98 ( | Chick abundance in 1979–92, 1994–98 ( |
| Overall adult survival (with SE) in 1996–2004 ( | Adult survival in 1996–2004 ( |
| Overall juvenile survival (with SE) in 1996–2003 ( | Juvenile survival in 1996–2003 ( |
| Fecundity (with SE) in 1997–99, 2003–05 ( | Fecundity in 1997–99, 2003–05 98 ( |
| Age at sexual maturity (with covariance matrix) ( | Age at sexual maturity ( |
| Bycatch total in 1976–2004 ( | Bycatch rate in 1976–2004 ( |
| Chick harvest in 1976–2004 ( | Chick harvest in 1976–2004 ( |
| Chick depredation by weka ( | Chick depredation by weka ( |
| Mean (Oct-Sep) SOI during 1974–2005 ( | Fecundity in 1976–2005 ( |
| Mean (Apr-Mar) SOI during 1975–2006 ( | Adult and juvenile survival in 1976–2005 ( |
| Maximum adult survival ( | Adult survival in 1976–2005 ( |
| Maximum fecundity ( | Fecundity in 1976–2005 ( |
Description of alternatives to the best model (S-1F0) that were fitted in the sensitivity analysis.
| Model | Parameter | Original | New | Description |
|---|---|---|---|---|
| Estimate | Upper limit 1 | Bycatch at upper limit of Uhlmann et al. (2005) | ||
| Estimate | Upper limit 2 | Bycatch at upper limit of Uhlmann et al. (2005) with | ||
| 0.520 | 0.416 | Mean observed fecundity = 0.8 x estimate | ||
| 0.520 | 0.624 | Mean observed fecundity = 1.2 x estimate | ||
| 0.9 | 0.8 | Maximum fecundity rate = 0.8 | ||
| 0.980 | 0.999 | Maximum survival rate = 0.999 | ||
| Estimate | Lower limit | Harvest at lower limit of Bragg et al. (2007) | ||
| Estimate | Upper limit | Harvest at upper limit of Bragg et al. (2007) | ||
| 0.983 | 0.973 | Observed trend one percentage-point below estimate | ||
| 0.983 | 0.993 | Observed trend one percentage-point above estimate |
ΔW values and WAIC model weights for models with different relationships between adult survival and SOI, and fecundity and SOI.
| Model | ΔW | Weight |
|---|---|---|
| 0.0 | 0.49 | |
| 1.7 | 0.21 | |
| 2.0 | 0.17 | |
| 4.6 | 0.04 | |
| 4.7 | 0.04 | |
| 6.0 | 0.02 | |
| 6.8 | 0.02 | |
| 8.2 | 0.01 | |
| 13.4 | 0.00 | |
| 15.2 | 0.00 | |
| 18.0 | 0.00 | |
| 18.7 | 0.00 | |
| 19.5 | 0.00 |
Fig 2Fit of the demographic models to harvest data.
Observed and predicted catch per unit effort (CPUE) data from harvesting of tītī chicks in New Zealand during the period 1979–1998. In both plots the solid line shows the model-averaged posterior mean for CPUE. In (a) the dashed lines show the 95% model-averaged credible interval; in (b) the dots are the observed CPUE values and the dashed lines show the 95% model-averaged 95% prediction interval. Model averaging was performed using WAIC model weights.
Fig 3Southern Oscillation Index versus adult survival and fecundity of tītī.
Estimated relationship, based on the best model (S–1F0), between SOI and both adult survival rate and fecundity rate, for tītī in New Zealand during the period 1976–2005, plotted against the observed values of and respectively (dots), together with 95% credible intervals (dashed).
Fig 4Effects of climate, harvesting, bycatch, and weka-depredation on tītī population dynamics.
Model-averaged posterior mean of population size of tītī in the New Zealand region for the period 1976–2005 (black), together with the model-averaged posterior mean of the predicted population size in the absence of harvest (blue), absence of bycatch (orange), absence of weka (green), and absence of a relationship between SOI and adult survival (red). Model averaging was performed using WAIC model weights.
Fig 5Effects of including process error in the best-fitting model on the relationship between SOI and both adult survival and fecundity.
Estimated relationships (solid) between a) adult survival from the best model (S–1F0) and ; b) adult survival from the modified best model and ; c) fecundity from the best model (S–1F0) and ; d) fecundity the modified best model and . The dashed lines are 95% credible intervals.
Fig 6Effects of including process error in the best-fitting model on the estimation of CPUE and the effects of climate, harvesting, bycatch, and weka-depredation.
Posterior means (solid) and 95% credible intervals (dashed) for a) CPUE from the best model (S–1F0) and b) CPUE from the modified best model, plus posterior means of population size (black), predicted population size in the absence of harvest (blue), the absence of bycatch (orange), the absence of weka (green), and the absence of a relationship between SOI and adult survival (red) c) from the best model (S–1F0) and d) from the modified best model.
Fig 7Sensitivity analysis for the best-fitting demographic model.
Comparison of estimates, between models with different input parameter values, of a) the coefficient of the relationship between fecundity and SOI, b) the coefficient of the relationship between adult survival and SOI, c) the predicted population size in 2005 relative to the predicted population size in 2005 in the absence of harvesting, d) the predicted population size in 2005 relative to the predicted population size in 2005 in the absence of fisheries bycatch, e) the predicted population size in 2005 relative to the predicted population size in 2005 in the absence of weka depredation, and f) the predicted population size in 2005 relative to the predicted population size in 2005 in the absence of harvesting, bycatch and weka depredation. Dots are posterior means and error bars show the central 95% credible intervals.