Literature DB >> 33300043

Reconstitution of mammalian mitochondrial translation system capable of correct initiation and long polypeptide synthesis from leaderless mRNA.

Muhoon Lee1, Noriko Matsunaga1, Shiori Akabane1,2, Ippei Yasuda1, Takuya Ueda1,3, Nono Takeuchi-Tomita1.   

Abstract

Mammalian mitochondria have their own dedicated protein synthesis system, which produces 13 essential subunits of the oxidative phosphorylation complexes. We have reconstituted an in vitro translation system from mammalian mitochondria, utilizing purified recombinant mitochondrial translation factors, 55S ribosomes from pig liver mitochondria, and a tRNA mixture from either Escherichia coli or yeast. The system is capable of translating leaderless mRNAs encoding model proteins (DHFR and nanoLuciferase) or some mtDNA-encoded proteins. We show that a leaderless mRNA, encoding nanoLuciferase, is faithfully initiated without the need for any auxiliary factors other than IF-2mt and IF-3mt. We found that the ribosome-dependent GTPase activities of both the translocase EF-G1mt and the recycling factor EF-G2mt are insensitive to fusidic acid (FA), the translation inhibitor that targets bacterial EF-G homologs, and consequently the system is resistant to FA. Moreover, we demonstrate that a polyproline sequence in the protein causes 55S mitochondrial ribosome stalling, yielding ribosome nascent chain complexes. Analyses of the effects of the Mg concentration on the polyproline-mediated ribosome stalling suggested the unique regulation of peptide elongation by the mitoribosome. This system will be useful for analyzing the mechanism of translation initiation, and the interactions between the nascent peptide chain and the mitochondrial ribosome.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

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Year:  2021        PMID: 33300043      PMCID: PMC7797035          DOI: 10.1093/nar/gkaa1165

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  80 in total

1.  Cell-free translation reconstituted with purified components.

Authors:  Y Shimizu; A Inoue; Y Tomari; T Suzuki; T Yokogawa; K Nishikawa; T Ueda
Journal:  Nat Biotechnol       Date:  2001-08       Impact factor: 54.908

2.  Mitochondrial toxicity associated with linezolid.

Authors:  Alex Soriano; Oscar Miró; Josep Mensa
Journal:  N Engl J Med       Date:  2005-11-24       Impact factor: 91.245

3.  EF-G-dependent GTPase on the ribosome. conformational change and fusidic acid inhibition.

Authors:  Hyuk-Soo Seo; Sameem Abedin; Detlev Kamp; Daniel N Wilson; Knud H Nierhaus; Barry S Cooperman
Journal:  Biochemistry       Date:  2006-02-28       Impact factor: 3.162

4.  Proteins of mammalian mitochondrial ribosomes.

Authors:  S F Pietromonaco; N D Denslow; T W O'Brien
Journal:  Biochimie       Date:  1991-06       Impact factor: 4.079

5.  Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.

Authors:  Eva Kummer; Nenad Ban
Journal:  EMBO J       Date:  2020-06-30       Impact factor: 11.598

6.  The dynamic structure of EF-G studied by fusidic acid resistance and internal revertants.

Authors:  U Johanson; A Aevarsson; A Liljas; D Hughes
Journal:  J Mol Biol       Date:  1996-05-10       Impact factor: 5.469

7.  Proteomic analysis of the mammalian mitochondrial ribosome. Identification of protein components in the 28 S small subunit.

Authors:  T Suzuki; M Terasaki; C Takemoto-Hori; T Hanada; T Ueda; A Wada; K Watanabe
Journal:  J Biol Chem       Date:  2001-06-11       Impact factor: 5.157

8.  EF-P is essential for rapid synthesis of proteins containing consecutive proline residues.

Authors:  Lili K Doerfel; Ingo Wohlgemuth; Christina Kothe; Frank Peske; Henning Urlaub; Marina V Rodnina
Journal:  Science       Date:  2012-12-13       Impact factor: 47.728

9.  Expression and characterization of isoform 1 of human mitochondrial elongation factor G.

Authors:  Kalpana Bhargava; Paul Templeton; Linda L Spremulli
Journal:  Protein Expr Purif       Date:  2004-10       Impact factor: 1.650

10.  Mitochondrial Protein Synthesis Adapts to Influx of Nuclear-Encoded Protein.

Authors:  Ricarda Richter-Dennerlein; Silke Oeljeklaus; Isotta Lorenzi; Christin Ronsör; Bettina Bareth; Alexander Benjamin Schendzielorz; Cong Wang; Bettina Warscheid; Peter Rehling; Sven Dennerlein
Journal:  Cell       Date:  2016-09-29       Impact factor: 41.582

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  4 in total

1.  In Vitro Reconstitution of Yeast Translation System Capable of Synthesizing Long Polypeptide and Recapitulating Programmed Ribosome Stalling.

Authors:  Riku Nagai; Yichen Xu; Chang Liu; Ayaka Shimabukuro; Nono Takeuchi-Tomita
Journal:  Methods Protoc       Date:  2021-07-04

2.  Mito-FUNCAT-FACS reveals cellular heterogeneity in mitochondrial translation.

Authors:  Yusuke Kimura; Hironori Saito; Tatsuya Osaki; Yasuhiro Ikegami; Taisei Wakigawa; Yoshiho Ikeuchi; Shintaro Iwasaki
Journal:  RNA       Date:  2022-03-07       Impact factor: 5.636

Review 3.  Maintaining mitochondrial ribosome function: The role of ribosome rescue and recycling factors.

Authors:  Franziska Nadler; Elena Lavdovskaia; Ricarda Richter-Dennerlein
Journal:  RNA Biol       Date:  2021-12-31       Impact factor: 4.652

4.  Balanced mitochondrial and cytosolic translatomes underlie the biogenesis of human respiratory complexes.

Authors:  Iliana Soto; Mary Couvillion; Katja G Hansen; Erik McShane; J Conor Moran; Antoni Barrientos; L Stirling Churchman
Journal:  Genome Biol       Date:  2022-08-09       Impact factor: 17.906

  4 in total

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