Literature DB >> 33281277

An Orthogonally Equivariant Estimator of the Covariance Matrix in High Dimensions and for Small Sample Sizes.

Samprit Banerjee1, Stefano Monni2.   

Abstract

We introduce an estimation method of covariance matrices in a high-dimensional setting, i.e., when the dimension of the matrix, p, is larger than the sample size n. Specifically, we propose an orthogonally equivariant estimator. The eigenvectors of such estimator are the same as those of the sample covariance matrix. The eigenvalue estimates are obtained from an adjusted profile likelihood function derived by approximating the integral of the density function of the sample covariance matrix over its eigenvectors, which is a challenging problem in its own right. Exact solutions to the approximate likelihood equations are obtained and employed to construct estimates that involve a tuning parameter. Bootstrap and cross-validation based algorithms are proposed to choose this tuning parameter under various loss functions. Finally, comparisons with two well-known orthogonally equivariant estimators are given, which are based on Monte-Carlo risk estimates for simulated data and misclassification errors in real data analyses.

Entities:  

Keywords:  adjusted profile likelihood; covariance matrix estimation; high-dimensional inference; singular Wishart distribution

Year:  2020        PMID: 33281277      PMCID: PMC7709931          DOI: 10.1016/j.jspi.2020.10.006

Source DB:  PubMed          Journal:  J Stat Plan Inference        ISSN: 0378-3758            Impact factor:   1.095


  4 in total

1.  Sparse estimation of a covariance matrix.

Authors:  Jacob Bien; Robert J Tibshirani
Journal:  Biometrika       Date:  2011-12       Impact factor: 2.445

2.  Pharmacogenomic predictor of sensitivity to preoperative chemotherapy with paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide in breast cancer.

Authors:  Kenneth R Hess; Keith Anderson; W Fraser Symmans; Vicente Valero; Nuhad Ibrahim; Jaime A Mejia; Daniel Booser; Richard L Theriault; Aman U Buzdar; Peter J Dempsey; Roman Rouzier; Nour Sneige; Jeffrey S Ross; Tatiana Vidaurre; Henry L Gómez; Gabriel N Hortobagyi; Lajos Pusztai
Journal:  J Clin Oncol       Date:  2006-08-08       Impact factor: 44.544

3.  Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.

Authors:  T R Golub; D K Slonim; P Tamayo; C Huard; M Gaasenbeek; J P Mesirov; H Coller; M L Loh; J R Downing; M A Caligiuri; C D Bloomfield; E S Lander
Journal:  Science       Date:  1999-10-15       Impact factor: 47.728

4.  Condition Number Regularized Covariance Estimation.

Authors:  Joong-Ho Won; Johan Lim; Seung-Jean Kim; Bala Rajaratnam
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2013-06-01       Impact factor: 4.488

  4 in total

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