| Literature DB >> 33278516 |
HariOm Singh1, Ranjana Choudhari2, Vijay Nema3, Abdul Arif Khan4.
Abstract
BACKGROUND: A carboxypeptidase protein called ACE2 is found in many organs. ACE2 protein can play a pivotal role to regulate the pathological changes of several diseases including COVID-19. TMPRSS2 gene is expressed in many human tissues and plays a critical role in spreading the infection of the viruses including coronavirus and progression of prostate cancer, and hence could be used as a potential drug target. There are limited reports on occurrence of genetic polymorphism of ACE2 and TMPRSS2 in general population, expressions in pathological conditions, and its impact on COVID-19 disease. Hence we comprehended the occurrence of ACE2, TMPRSS2 polymorphism in general population, expression in various diseases and its impact on COVID-19 disease.Entities:
Keywords: ACE2; Antiviral response; Genetic polymorphism; SARS-CoV-2; TMPRSS2
Mesh:
Substances:
Year: 2020 PMID: 33278516 PMCID: PMC7709597 DOI: 10.1016/j.micpath.2020.104621
Source DB: PubMed Journal: Microb Pathog ISSN: 0882-4010 Impact factor: 3.848
Fig. 1Role of polymorphism.
Fig. 2ACE2 polymorphism (Adopted from Zhang et al., 2018).
Genetic polymorphism of ACE2 and TMPRSS2 in general population.
| S.No | Gene & Choromo somal | rs number of SNPs | Genotypes | Genotype | Population | Reference |
|---|---|---|---|---|---|---|
| 1 | rs1514283 T/C | TT | 920(96.2) | China | ||
| CT | 30(3.1) | |||||
| CC | 6(0.7) | |||||
| 2 | rs4646155 C/T | CC | 920(96.2) | China | ||
| CT | 30(3.1) | |||||
| TT | 6(0.7) | |||||
| 3 | rs4646176 C/G | CC | 916(96.2) | China | ||
| CG | 30(3.2) | |||||
| GG | 6(0.6) | |||||
| 4 | rs879922 G/C | GG | 908(95.2) | China | ||
| CG | 40(4.2) | |||||
| CC | 06(0.6) | |||||
| 5 | rs1514283 T/C | TT | 920(96.2) | China | ||
| CT | 30(3.1) | |||||
| CC | 6(0.7) | |||||
| 6 | ACE2 (Xp22.2) | rs4646155 C/T | CC | 920(96.2) | China | |
| CT | 30(3.1) | |||||
| TT | 6(0.7) | |||||
| 7 | rs4646176 C/G | CC | 916(96.2) | China | ||
| CG | 30(3.2) | |||||
| GG | 6(0.6) | |||||
| 8 | rs2074192 C/T | CC | 118(50.6) | China | Yi Luo et al., 2019 | |
| TC + CC | 115(49.4) | |||||
| 9 | rs2106809 C/T | CC + CT | 121(51.9) | China | Yi Luo et al., 2019 | |
| TT | 12(48.1) | |||||
| 10 | rs4240157 C/T | CC + CT | 43(18.5) | China | Yi Luo et al., 2019 | |
| TT | 190(81.5) | |||||
| 11 | rs4646155 C/T | CC | 211(90.6) | China | Yi Luo et al., 2019 | |
| TT + CT | 22(9.4) | |||||
| 12 | rs4646188 C/T | CC | 74(31.8) | China | Yi Luo et al., 2019 | |
| TT + CT | 159(68.2) | |||||
| 13 | rs4830542 C/T | CC + CT | 43(18.5) | China | Yi Luo et al., 2019 | |
| TT | 190(81.5) | |||||
| 14 | rs879922 C/G | CC + CG | 40(17.2) | China | Yi Luo et al., 2019 | |
| GG | 193(82.8) | |||||
| 15 | rs2106809 I/D (C > T) | CC | India | Patnaik et al., 2014 | ||
| CT | ||||||
| TT | ||||||
| 16 | rs1800764-3903C/T | TT | 50(30) | Poland | G. Deja et al., 20140 | |
| CT | 84(49) | |||||
| CC | 36(21) | |||||
| 17 | ACE2 (Xp22.2) | rs4459609-5486A/C | AA | 60(35) | Poland | G. Deja et al., 20140 |
| AC | 83(48) | |||||
| CC | 30(17) | |||||
| 18 | rs2746071-638A/G | AA | 102(59) | Poland | G. Deja et al., 20140 | |
| AG | 58(34) | |||||
| GG | 13(8) | |||||
| 19 | rs2106809 I/D | II | 34(23.77) | Saudi Arabia | Jamal SM Sabir et al., 2019 | |
| ID | 32(22.37) | |||||
| DD | 77(53.84) | |||||
| 20 | rs2070788 G/A | GG | 9 (8.5) | Hong Kong | ||
| GA | 43 (40.6) | |||||
| AA | 54 (50.9) | |||||
| 21 | rs383510 T/C | TT | 7 (6.6) | Hong Kong | ||
| TC | 47 (44.3) | |||||
| CC | 52 (49.1) |
Expression of ACE2 and TMPRSS2 genes in various organs and tissues.
| S.No | Gene & chromosomal location | Expression in Human organs and tissues | Reference |
|---|---|---|---|
| 1 | cardiovascular, renal and gastrointestinal tissues | (Mary Donoghue et al., 2000). | |
| 2 | brain lung and testis | (Harmer et al., 2002). | |
| 3 | alveolar epithelial cells | (Hamming et al., 2004), | |
| 4 | cell lines | (Li et al., 2003). | |
| 5 | overexpression of | (Bindom et al., 2020). | |
| 6 | Over-expression of ACE1 receptor as in the presence of the ACE1 DD-genotype (i.e., rs4646994, rs1799752, rs4340, rs13447447) in combination with ACE2 downregulation due to SARS-CoV-2 infection and/or the presence of the ACE2 8790 G-allele (i.e., rs2285666), results in ACE1/ACE2 imbalance, leading to ‘Renin Angiotensin System’ over-activation (Ang-II) and ultimate lung failure. | (Donato Gemmati et al., 2020) | |
| 7 | Expressed in type 1 and 2 alveolar cells | (Waradon et al., 2003). | |
| 8 | mRNA expression is elevated in androgen-stimulated prostate malignant (LNCaP) cells | (Lin et al., 1999). | |
| 9 | expressions are correlated with initiation of SARS-CoV-2 and other viral infections of respiratory tract | (Stopsack et al., 2020) | |
| 10 | High expression of | (Linda Kachuri et al., 2020). |
Fig. 3TMPRSS2 Gene polymorphism.