Literature DB >> 33278343

Meiotic Cells Counteract Programmed Retrotransposon Activation via RNA-Binding Translational Repressor Assemblies.

Raphaelle Laureau1, Annie Dyatel1, Gizem Dursuk1, Samantha Brown1, Hannah Adeoye1, Jia-Xing Yue2, Matteo De Chiara2, Anthony Harris3, Elçin Ünal3, Gianni Liti2, Ian R Adams4, Luke E Berchowitz5.   

Abstract

Retrotransposon proliferation poses a threat to germline integrity. While retrotransposons must be activated in developing germ cells in order to survive and propagate, how they are selectively activated in the context of meiosis is unclear. We demonstrate that the transcriptional activation of Ty3/Gypsy retrotransposons and host defense are controlled by master meiotic regulators. We show that budding yeast Ty3/Gypsy co-opts binding sites of the essential meiotic transcription factor Ndt80 upstream of the integration site, thereby tightly linking its transcriptional activation to meiotic progression. We also elucidate how yeast cells thwart Ty3/Gypsy proliferation by blocking translation of the retrotransposon mRNA using amyloid-like assemblies of the RNA-binding protein Rim4. In mammals, several inactive Ty3/Gypsy elements are undergoing domestication. We show that mammals utilize equivalent master meiotic regulators (Stra8, Mybl1, Dazl) to regulate Ty3/Gypsy-derived genes in developing gametes. Our findings inform how genes that are evolving from retrotransposons can build upon existing regulatory networks during domestication.
Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  gene evolution; meiosis; retrotransposons; transcriptional regulation; translational control

Year:  2020        PMID: 33278343      PMCID: PMC7116619          DOI: 10.1016/j.devcel.2020.11.008

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  98 in total

1.  Virus-like particles of the Ty3 retrotransposon assemble in association with P-body components.

Authors:  Nadejda Beliakova-Bethell; Carla Beckham; Thomas H Giddings; Mark Winey; Roy Parker; Suzanne Sandmeyer
Journal:  RNA       Date:  2006-01       Impact factor: 4.942

2.  A-MYB (MYBL1) transcription factor is a master regulator of male meiosis.

Authors:  Ewelina Bolcun-Filas; Laura A Bannister; Alex Barash; Kerry J Schimenti; Suzanne A Hartford; John J Eppig; Mary Ann Handel; Lishuang Shen; John C Schimenti
Journal:  Development       Date:  2011-08       Impact factor: 6.868

3.  Meiosis I is established through division-specific translational control of a cyclin.

Authors:  Thomas M Carlile; Angelika Amon
Journal:  Cell       Date:  2008-04-18       Impact factor: 41.582

4.  Regulated Formation of an Amyloid-like Translational Repressor Governs Gametogenesis.

Authors:  Luke E Berchowitz; Greg Kabachinski; Margaret R Walker; Thomas M Carlile; Wendy V Gilbert; Thomas U Schwartz; Angelika Amon
Journal:  Cell       Date:  2015-09-24       Impact factor: 41.582

5.  L1 retrotransposition occurs mainly in embryogenesis and creates somatic mosaicism.

Authors:  Hiroki Kano; Irene Godoy; Christine Courtney; Melissa R Vetter; George L Gerton; Eric M Ostertag; Haig H Kazazian
Journal:  Genes Dev       Date:  2009-06-01       Impact factor: 11.361

6.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

7.  Developmental regulation of an organelle tether coordinates mitochondrial remodeling in meiosis.

Authors:  Eric M Sawyer; Pallavi R Joshi; Victoria Jorgensen; Julius Yunus; Luke E Berchowitz; Elçin Ünal
Journal:  J Cell Biol       Date:  2018-12-11       Impact factor: 10.539

8.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.

Authors:  Mark D Robinson; Davis J McCarthy; Gordon K Smyth
Journal:  Bioinformatics       Date:  2009-11-11       Impact factor: 6.937

9.  Genesis and regulatory wiring of retroelement-derived domesticated genes: a phylogenomic perspective.

Authors:  Janez Kokošar; Dušan Kordiš
Journal:  Mol Biol Evol       Date:  2013-01-24       Impact factor: 16.240

10.  deepTools2: a next generation web server for deep-sequencing data analysis.

Authors:  Fidel Ramírez; Devon P Ryan; Björn Grüning; Vivek Bhardwaj; Fabian Kilpert; Andreas S Richter; Steffen Heyne; Friederike Dündar; Thomas Manke
Journal:  Nucleic Acids Res       Date:  2016-04-13       Impact factor: 16.971

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  1 in total

Review 1.  The Role of Transposable Elements in Sexual Development.

Authors:  Vic Shao-Chih Chiang; Holly DeRosa; Jin Ho Park; Richard G Hunter
Journal:  Front Behav Neurosci       Date:  2022-07-07       Impact factor: 3.617

  1 in total

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