Literature DB >> 33266138

Using Personal Genomic Data within Primary Care: A Bioinformatics Approach to Pharmacogenomics.

Rick Overkleeft1,2, Judith Tommel3, Andrea W M Evers3, Johan T den Dunnen4, Marco Roos5, Marie-José Hoefmans6, Walter E Schrader7, Jesse J Swen8, Mattijs E Numans9, Elisa J F Houwink9,10.   

Abstract

One application of personalized medicine is the tailoring of medication to the individual, so that the medication will have the highest chance of success. In order to individualize medication, one must have a complete inventory of all current pharmaceutical compounds (a detailed formulary) combined with pharmacogenetic datasets, the genetic makeup of the patient, their (medical) family history and other health-related data. For healthcare professionals to make the best use of this information, it must be visualized in a way that makes the most medically relevant data accessible for their decision-making. Similarly, to enable bioinformatics analysis of these data, it must be prepared and provided through an interface for controlled computational analysis. Due to the high degree of personal information gathered for such initiatives, privacy-sensitive implementation choices and ethical standards are paramount. The Personal Genetic Locker project provides an approach to enable the use of personal genomic data in primary care. In this paper, we provide a description of the Personal Genetic Locker project and show its utility through a use case based on open standards, which is illustrated by the 4MedBox system.

Entities:  

Keywords:  Personal Genetic Locker; ethics; genomics; personalized medicine; pharmacogenomics; primary care; research

Mesh:

Year:  2020        PMID: 33266138      PMCID: PMC7761137          DOI: 10.3390/genes11121443

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  30 in total

1.  The DNA Bank: High-Security Bank Accounts to Protect and Share Your Genetic Identity.

Authors:  Johan T den Dunnen
Journal:  Hum Mutat       Date:  2015-07       Impact factor: 4.878

Review 2.  Pharmacogenetic Information in Clinical Guidelines: The European Perspective.

Authors:  Jesse J Swen; Marga Nijenhuis; Mandy van Rhenen; Nienke J de Boer-Veger; Anne-Marie Buunk; Elisa J F Houwink; Hans Mulder; Gerard A Rongen; Ron H N van Schaik; Jan van der Weide; Bob Wilffert; Vera H M Deneer; Henk-Jan Guchelaar
Journal:  Clin Pharmacol Ther       Date:  2018-03-30       Impact factor: 6.875

3.  Distributed learning on 20 000+ lung cancer patients - The Personal Health Train.

Authors:  Timo M Deist; Frank J W M Dankers; Priyanka Ojha; M Scott Marshall; Tomas Janssen; Corinne Faivre-Finn; Carlotta Masciocchi; Vincenzo Valentini; Jiazhou Wang; Jiayan Chen; Zhen Zhang; Emiliano Spezi; Mick Button; Joost Jan Nuyttens; René Vernhout; Johan van Soest; Arthur Jochems; René Monshouwer; Johan Bussink; Gareth Price; Philippe Lambin; Andre Dekker
Journal:  Radiother Oncol       Date:  2020-01-03       Impact factor: 6.280

4.  Public and biobank participant attitudes toward genetic research participation and data sharing.

Authors:  A A Lemke; W A Wolf; J Hebert-Beirne; M E Smith
Journal:  Public Health Genomics       Date:  2010-01-15       Impact factor: 2.000

Review 5.  Patients' views on the effectiveness of patient-held records: a systematic review and thematic synthesis of qualitative studies.

Authors:  Samantha A Sartain; Samantha Stressing; Jacqui Prieto
Journal:  Health Expect       Date:  2014-07-24       Impact factor: 3.377

6.  Enhancing diversity to reduce health information disparities and build an evidence base for genomic medicine.

Authors:  Lucia A Hindorff; Vence L Bonham; Lucila Ohno-Machado
Journal:  Per Med       Date:  2018-09-13       Impact factor: 2.512

7.  Family history-taking in community family practice: implications for genetic screening.

Authors:  L S Acheson; G L Wiesner; S J Zyzanski; M A Goodwin; K C Stange
Journal:  Genet Med       Date:  2000 May-Jun       Impact factor: 8.822

8.  Genetic educational needs and the role of genetics in primary care: a focus group study with multiple perspectives.

Authors:  Elisa Jf Houwink; Scheltus J van Luijk; Lidewij Henneman; Cees van der Vleuten; Geert Jan Dinant; Martina C Cornel
Journal:  BMC Fam Pract       Date:  2011-02-17       Impact factor: 2.497

9.  The FAIR Guiding Principles for scientific data management and stewardship.

Authors:  Mark D Wilkinson; Michel Dumontier; I Jsbrand Jan Aalbersberg; Gabrielle Appleton; Myles Axton; Arie Baak; Niklas Blomberg; Jan-Willem Boiten; Luiz Bonino da Silva Santos; Philip E Bourne; Jildau Bouwman; Anthony J Brookes; Tim Clark; Mercè Crosas; Ingrid Dillo; Olivier Dumon; Scott Edmunds; Chris T Evelo; Richard Finkers; Alejandra Gonzalez-Beltran; Alasdair J G Gray; Paul Groth; Carole Goble; Jeffrey S Grethe; Jaap Heringa; Peter A C 't Hoen; Rob Hooft; Tobias Kuhn; Ruben Kok; Joost Kok; Scott J Lusher; Maryann E Martone; Albert Mons; Abel L Packer; Bengt Persson; Philippe Rocca-Serra; Marco Roos; Rene van Schaik; Susanna-Assunta Sansone; Erik Schultes; Thierry Sengstag; Ted Slater; George Strawn; Morris A Swertz; Mark Thompson; Johan van der Lei; Erik van Mulligen; Jan Velterop; Andra Waagmeester; Peter Wittenburg; Katherine Wolstencroft; Jun Zhao; Barend Mons
Journal:  Sci Data       Date:  2016-03-15       Impact factor: 6.444

10.  SERIES: eHealth in primary care. Part 3: eHealth education in primary care.

Authors:  Elisa J F Houwink; Marise J Kasteleyn; Laurence Alpay; Christopher Pearce; Kerryn Butler-Henderson; Eline Meijer; Sanne van Kampen; Anke Versluis; Tobias N Bonten; Jens H van Dalfsen; Petra G van Peet; Ybranda Koster; Beerend P Hierck; Ilke Jeeninga; Sanne van Luenen; Rianne M J J van der Kleij; Niels H Chavannes; Anneke W M Kramer
Journal:  Eur J Gen Pract       Date:  2020-12       Impact factor: 1.904

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  2 in total

Review 1.  FHH Quick App Review: How Can a Quality Review Process Assist Primary Care Providers in Choosing a Family Health History App for Patient Care?

Authors:  Grant M Wood; Sander van Boom; Kasper Recourt; Elisa J F Houwink
Journal:  Genes (Basel)       Date:  2022-08-08       Impact factor: 4.141

2.  Pharmacogenomic Determinants of Interindividual Drug Response Variability: From Discovery to Implementation.

Authors:  Stuart A Scott; Jesse J Swen
Journal:  Genes (Basel)       Date:  2021-03-10       Impact factor: 4.096

  2 in total

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