Literature DB >> 33258524

Biological Nanopore Approach for Single-Molecule Protein Sequencing.

Zheng-Li Hu1, Ming-Zhu Huo1, Yi-Lun Ying1,2, Yi-Tao Long1.   

Abstract

Proteins are responsible for the occurrence and treatment of many diseases, and therefore protein sequencing will revolutionize proteomics and clinical diagnostics. Biological nanopore approach has proved successful for single-molecule DNA sequencing, which resolves the identities of 4 natural deoxyribonucleotides based on the current blockages and duration times of their translocations across the nanopore confinement. However, open challenges still remain for biological nanopores to sequentially identify each amino acid (AA) of single proteins due to the inherent complexity of 20 proteinogenic AAs in charges, volumes, hydrophobicity and structures. Herein, we focus on recent exciting advances in biological nanopores for single-molecule protein sequencing (SMPS) from native protein unfolding, control of peptide translocation, AA identification to applications in disease detection.
© 2020 Wiley-VCH GmbH.

Entities:  

Keywords:  biological nanopore; diagnostics; nano-confinement; protein sequencing; single-molecule sensing

Year:  2021        PMID: 33258524     DOI: 10.1002/anie.202013462

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  15 in total

1.  Single-File Translocation Dynamics of SDS-Denatured, Whole Proteins through Sub-5 nm Solid-State Nanopores.

Authors:  Neeraj Soni; Noam Freundlich; Shilo Ohayon; Diana Huttner; Amit Meller
Journal:  ACS Nano       Date:  2022-07-03       Impact factor: 18.027

2.  Translocation Behaviors of Synthetic Polyelectrolytes through Alpha-Hemolysin (α-HL) and Mycobacterium smegmatis Porin A (MspA) Nanopores.

Authors:  Xiaoqin Wang; Kaden C Stevens; Jeffrey M Ting; Alexander E Marras; Gelareh Rezvan; Xiaojun Wei; Nader Taheri-Qazvini; Matthew V Tirrell; Chang Liu
Journal:  J Electrochem Soc       Date:  2022-05-11       Impact factor: 4.386

3.  Efficient Lipid Bilayer Formation by Dipping Lipid-Loaded Microperforated Sheet in Aqueous Solution.

Authors:  Nobuo Misawa; Satoshi Fujii; Koki Kamiya; Toshihisa Osaki; Shoji Takeuchi
Journal:  Micromachines (Basel)       Date:  2021-01-05       Impact factor: 2.891

Review 4.  Biological Nanopores: Engineering on Demand.

Authors:  Ana Crnković; Marija Srnko; Gregor Anderluh
Journal:  Life (Basel)       Date:  2021-01-05

5.  Large-Peptide Permeation Through a Membrane Channel: Understanding Protamine Translocation Through CymA from Klebsiella Oxytoca*.

Authors:  Sushil Pangeni; Jigneshkumar Dahyabhai Prajapati; Jayesh Bafna; Mohamed Nilam; Werner M Nau; Ulrich Kleinekathöfer; Mathias Winterhalter
Journal:  Angew Chem Int Ed Engl       Date:  2021-03-03       Impact factor: 15.336

6.  ProtSeq: Toward high-throughput, single-molecule protein sequencing via amino acid conversion into DNA barcodes.

Authors:  Jessica M Hong; Michael Gibbons; Ali Bashir; Diana Wu; Shirley Shao; Zachary Cutts; Mariya Chavarha; Ye Chen; Lauren Schiff; Mikelle Foster; Victoria A Church; Llyke Ching; Sara Ahadi; Anna Hieu-Thao Le; Alexander Tran; Michelle Dimon; Marc Coram; Brian Williams; Phillip Jess; Marc Berndl; Annalisa Pawlosky
Journal:  iScience       Date:  2021-12-11

7.  Enhanced Optical Spectroscopy for Multiplexed DNA and Protein-Sequencing with Plasmonic Nanopores: Challenges and Prospects.

Authors:  Wang Li; Juan Zhou; Nicolò Maccaferri; Roman Krahne; Kang Wang; Denis Garoli
Journal:  Anal Chem       Date:  2022-01-01       Impact factor: 6.986

Review 8.  Biological nanopores for single-molecule sensing.

Authors:  Simon Finn Mayer; Chan Cao; Matteo Dal Peraro
Journal:  iScience       Date:  2022-03-23

Review 9.  Visual Detection of COVID-19 from Materials Aspect.

Authors:  Gang Wang; Le Wang; Zheyi Meng; Xiaolong Su; Chao Jia; Xiaolan Qiao; Shaowu Pan; Yinjun Chen; Yanhua Cheng; Meifang Zhu
Journal:  Adv Fiber Mater       Date:  2022-08-08

10.  Sensitive Detection of Single-Nucleotide Polymorphisms by Solid Nanopores Integrated With DNA Probed Nanoparticles.

Authors:  Ling Zhi Wu; Yuan Ye; Zhi Xuan Wang; Die Ma; Li Li; Guo Hao Xi; Bi Qing Bao; Li Xing Weng
Journal:  Front Bioeng Biotechnol       Date:  2021-06-30
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