Literature DB >> 33214150

Machine-learning iterative calculation of entropy for physical systems.

Amit Nir1,2, Eran Sela1, Roy Beck3,2,4, Yohai Bar-Sinai3,2,5.   

Abstract

Characterizing the entropy of a system is a crucial, and often computationally costly, step in understanding its thermodynamics. It plays a key role in the study of phase transitions, pattern formation, protein folding, and more. Current methods for entropy estimation suffer from a high computational cost, lack of generality, or inaccuracy and inability to treat complex, strongly interacting systems. In this paper, we present a method, termed machine-learning iterative calculation of entropy (MICE), for calculating the entropy by iteratively dividing the system into smaller subsystems and estimating the mutual information between each pair of halves. The estimation is performed with a recently proposed machine-learning algorithm which works with arbitrary network architectures that can be chosen to fit the structure and symmetries of the system at hand. We show that our method can calculate the entropy of various systems, both thermal and athermal, with state-of-the-art accuracy. Specifically, we study various classical spin systems and identify the jamming point of a bidisperse mixture of soft disks. Finally, we suggest that besides its role in estimating the entropy, the mutual information itself can provide an insightful diagnostic tool in the study of physical systems.

Entities:  

Keywords:  entropy estimation; jamming; machine learning; mutual information

Year:  2020        PMID: 33214150      PMCID: PMC7720104          DOI: 10.1073/pnas.2017042117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

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3.  Self-organization of bidisperse colloids in water droplets.

Authors:  Young-Sang Cho; Gi-Ra Yi; Jong-Min Lim; Shin-Hyun Kim; Vinothan N Manoharan; David J Pine; Seung-Man Yang
Journal:  J Am Chem Soc       Date:  2005-11-16       Impact factor: 15.419

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5.  Finite-size scaling at the jamming transition: corrections to scaling and the correlation-length critical exponent.

Authors:  Daniel Vågberg; Daniel Valdez-Balderas; M A Moore; Peter Olsson; S Teitel
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-03-28

6.  Crystallization, Reentrant Melting, and Resolubilization of Virus Nanoparticles.

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Journal:  ACS Nano       Date:  2017-10-02       Impact factor: 15.881

Review 7.  Deep learning.

Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

8.  Tensor renormalization group study of classical XY model on the square lattice.

Authors:  J F Yu; Z Y Xie; Y Meurice; Yuzhi Liu; A Denbleyker; Haiyuan Zou; M P Qin; J Chen; T Xiang
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2014-01-22

9.  Inferring entropy from structure.

Authors:  Gil Ariel; Haim Diamant
Journal:  Phys Rev E       Date:  2020-08       Impact factor: 2.529

10.  Universal and Accessible Entropy Estimation Using a Compression Algorithm.

Authors:  Ram Avinery; Micha Kornreich; Roy Beck
Journal:  Phys Rev Lett       Date:  2019-10-25       Impact factor: 9.185

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  1 in total

1.  Vibrational Entropy of Crystalline Solids from Covariance of Atomic Displacements.

Authors:  Yang Huang; Michael Widom
Journal:  Entropy (Basel)       Date:  2022-04-28       Impact factor: 2.738

  1 in total

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