Literature DB >> 28956913

Crystallization, Reentrant Melting, and Resolubilization of Virus Nanoparticles.

Roi Asor1,2, Orly Ben-Nun-Shaul3, Ariella Oppenheim3, Uri Raviv1,2.   

Abstract

Crystallization is a fundamental and ubiquitous process that is well understood in the case of atoms or small molecules, but its outcome is still hard to predict in the case of nanoparticles or macromolecular complexes. Controlling the organization of virus nanoparticles into a variety of 3D supramolecular architectures is often done by multivalent ions and is of great interest for biomedical applications such as drug or gene delivery and biosensing, as well as for bionanomaterials and catalysis. In this paper, we show that slow dialysis, over several hours, of wild-type Simian Virus 40 (wt SV40) nanoparticle solution against salt solutions containing MgCl2, with or without added NaCl, results in wt SV40 nanoparticles arranged in a body cubic center crystal structure with Im3m space group, as a thermodynamic product, in coexistence with soluble wt SV40 nanoparticles. The nanoparticle crystals formed above a critical MgCl2 concentrations. Reentrant melting and resolubilization of the virus nanoparticles took place when the MgCl2 concentrations passed a second threshold. Using synchrotron solution X-ray scattering we determined the structures and the mass fraction of the soluble and crystal phases as a function of MgCl2 and NaCl concentrations. A thermodynamic model, which balances the chemical potentials of the Mg2+ ions in each of the possible states, explains our observations. The model reveals the mechanism of both the crystallization and the reentrant melting and resolubilization and shows that counterion entropy is the main driving force for both processes.

Entities:  

Keywords:  bridging interactions; crystallization; like charge attraction; reentrant condensation; resolubilization; small-angle X-ray scattering; sv40

Mesh:

Year:  2017        PMID: 28956913      PMCID: PMC6545118          DOI: 10.1021/acsnano.7b03131

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  12 in total

1.  Assembly Reactions of Hepatitis B Capsid Protein into Capsid Nanoparticles Follow a Narrow Path through a Complex Reaction Landscape.

Authors:  Roi Asor; Lisa Selzer; Christopher John Schlicksup; Zhongchao Zhao; Adam Zlotnick; Uri Raviv
Journal:  ACS Nano       Date:  2019-06-25       Impact factor: 15.881

2.  D+: software for high-resolution hierarchical modeling of solution X-ray scattering from complex structures.

Authors:  Avi Ginsburg; Tal Ben-Nun; Roi Asor; Asaf Shemesh; Lea Fink; Roee Tekoah; Yehonatan Levartovsky; Daniel Khaykelson; Raviv Dharan; Amos Fellig; Uri Raviv
Journal:  J Appl Crystallogr       Date:  2019-02-01       Impact factor: 3.304

3.  Machine-learning iterative calculation of entropy for physical systems.

Authors:  Amit Nir; Eran Sela; Roy Beck; Yohai Bar-Sinai
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-19       Impact factor: 11.205

4.  pH stability and disassembly mechanism of wild-type simian virus 40.

Authors:  Roi Asor; Daniel Khaykelson; Orly Ben-Nun-Shaul; Yael Levi-Kalisman; Ariella Oppenheim; Uri Raviv
Journal:  Soft Matter       Date:  2020-02-27       Impact factor: 3.679

5.  Interacting Bacteria Surfaces.

Authors:  Uri Raviv
Journal:  Biophys J       Date:  2018-04-10       Impact factor: 4.033

Review 6.  Studying viruses using solution X-ray scattering.

Authors:  Daniel Khaykelson; Uri Raviv
Journal:  Biophys Rev       Date:  2020-02-15

7.  Mechanism of Tubulin Oligomers and Single-Ring Disassembly Catastrophe.

Authors:  Asaf Shemesh; Avi Ginsburg; Raviv Dharan; Yael Levi-Kalisman; Israel Ringel; Uri Raviv
Journal:  J Phys Chem Lett       Date:  2022-06-07       Impact factor: 6.888

8.  Assembly and Stability of Simian Virus 40 Polymorphs.

Authors:  Curt Waltmann; Roi Asor; Uri Raviv; Monica Olvera de la Cruz
Journal:  ACS Nano       Date:  2020-04-02       Impact factor: 15.881

9.  Unfolding of the chromatin fiber driven by overexpression of noninteracting bridging factors.

Authors:  Isha Malhotra; Bernardo Oyarzún; Bortolo Matteo Mognetti
Journal:  Biophys J       Date:  2021-01-14       Impact factor: 4.033

10.  Rapidly Forming Early Intermediate Structures Dictate the Pathway of Capsid Assembly.

Authors:  Roi Asor; Christopher John Schlicksup; Zhongchao Zhao; Adam Zlotnick; Uri Raviv
Journal:  J Am Chem Soc       Date:  2020-04-20       Impact factor: 15.419

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