| Literature DB >> 33192475 |
Yaling Jiang1, Bin Jiao1,2,3, Xinxin Liao1,2,3, Xuewen Xiao1, Xixi Liu1, Lu Shen1,2,3,4.
Abstract
Amyloid protein deposition is a common mechanism of hereditary amyloidosis (HA) and Alzheimer's disease (AD). Mutations of gelsolin (GSN), cystatin C (CST3), transthyretin (TTR), and integral membrane protein 2B (ITM2B) genes can lead to HA. But the relationship is unclear between these genes and AD. Genes targeted sequencing (GTS), including GSN, CST3, TTR, and ITM2B, was performed in a total of 636 patients with clinical AD and 365 normal controls from China. As a result, according to American College of Medical Genetics and Genomics (ACMG) guidelines, two novel likely pathogenic frame-shift mutations (GSN:c.1036delA:p.K346fs and GSN:c.8_35del:p.P3fs) were detected in five patients with AD, whose initial symptom was memory decline, accompanied with psychological and behavioral abnormalities later. Interestingly, the patient with K346fs mutation, presented cerebral β-amyloid protein deposition, had an early onset (48 years) and experienced rapid progression, while the other four patients with P3fs mutation had a late onset [(Mean ± SD): 69.50 ± 5.20 years] and a long course of illness [(Mean ± SD): 9.24 ± 4.86 years]. Besides, we also discovered 17 variants of uncertain significance (VUS) in these four genes. To our knowledge, we are the first to report AD phenotype with GSN mutations in patients with AD in the Chinese cohort. Although mutations in the GSN gene are rare, it may explain a small portion of clinically diagnosed AD.Entities:
Keywords: Alzheimer’s disease; China; gelsolin; genetics; hereditary amyloidosis
Year: 2020 PMID: 33192475 PMCID: PMC7533594 DOI: 10.3389/fnagi.2020.581524
Source DB: PubMed Journal: Front Aging Neurosci ISSN: 1663-4365 Impact factor: 5.750
Basic information of patients and controls.
| AD patients | Cognitive normal controls | |
|---|---|---|
| Numbers | 636 | 365 |
| Age of onset (years) | 66.17 ± 11.18 | 70.65 ± 5.35 |
| Gender | ||
| Male | 259 | 175 |
| Female | 377 | 190 |
| Race | ||
| Han nationality | 630 | 365 |
| Others | 6 | 0 |
| APOE | ||
| ε2/ε2 | 2 | 2 |
| ε2/ε3 | 50 | 54 |
| ε2/ε4 | 12 | 6 |
| ε3/ε3 | 321 | 237 |
| ε3/ε4 | 207 | 63 |
| ε4/ε4 | 44 | 3 |
Variants in genes of gelsolin (GSN), cystatin C (CST3), transthyretin (TTR), and integral membrane protein 2B (ITM2B).
| Gene name | Mutation name | ACMG | Patients | Normal controls | Mutation mode | HET/HOM | Risk dbSNP | gnomAD_g enome_EAS | ExAC_EAS | Polyphen2 | MutTaster | PROVEAN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c.8_35del:p.P3fs | Likely pathogenic (PVS1 + PM2) | Frameshift deletion | HET | rs764841269 | 4.90E-03 | 0 | NA | NA | NA | |||
| c.1036delA:p.K346fs | Likely pathogenic (PVS1 + PM2) | Frameshift deletion | HET | NA | NA | NA | NA | NA | NA | |||
| c.425G>A:p.R142Q | Uncertain significance (N) | Nonsynonymous SNV | HET | rs138153246 | 0 | 0 | B | D | N | |||
| c.613G>A:p.V205M | Uncertain significance (PM2) | Nonsynonymous SNV | HET | NA | NA | NA | D | D | N | |||
| c.863C >T:p.A288V | Uncertain significance (N) | Nonsynonymous SNV | HET | rs780252276 | 4.06E-04 | 0.0006 | B | N | N | |||
| c.902C >T:p.Y301C | Uncertain significance (PM2) | Nonsynonymous SNV | HET | rs758752620 | 5.80E-05 | 0.0001 | D | D | D | |||
| c.958C >T:p.P320S | Uncertain significance (N) | Nonsynonymous SNV | HET | rs768184900 | 0 | 0 | D | D | D | |||
| c.1055C >T:p.T352M | Uncertain significance (PM2 + BP4) | Nonsynonymous SNV | HET | NA | NA | NA | B | N | N | |||
| c.1406C >T:p.Y469C | Uncertain significance (PM2) | Nonsynonymous SNV | HET | rs375227932 | 4.06E-04 | 0.0003 | D | D | D | |||
| c.1655dupC:p.S522fs | Uncertain significance (PM4) | Frameshift insertion | HET | rs769989772 | 1.76E-04 | 0.0003 | NA | NA | NA | |||
| c.1730G >T:p.R577L | Uncertain significance (PM2) | Nonsynonymous SNV | HET | rs528604896 | 1.11E-03 | 0.001 | D | D | D | |||
| c.1793C >T:p.T598I | Uncertain significance (N) | Nonsynonymous SNV | HET | rs376326631 | 1.16E-04 | 0.0001 | D | D | D | |||
| c.2198C >T:p.T733M | Uncertain significance (PM2) | Nonsynonymous SNV | HET | rs142854368 | 0 | 0 | D | D | D | |||
| c.236G >T:p.R79L | Uncertain significance (PM2 + BP4) | 1 | 0 | Nonsynonymous SNV | HET | NA | NA | NA | P | N | D | |
| c.371C >T:p.S124F | Uncertain significance (PM2) | 2 | 0 | Nonsynonymous SNV | HET | rs754306266 | 0 | 0 | D | D | D | |
| c.62G>C:p.G21A | Uncertain significance (PM2) | 1 | 0 | Nonsynonymous SNV | HET | NA | NA | NA | B | N | N | |
| c.370C >T:p.R124C | Uncertain significance (PM2 + PP3) | 1 | 1 | Nonsynonymous SNV | HET | rs745834030 | 4.64E-04 | 0.0001 | P | N | N | |
| c.20C >T:p.N7S | Uncertain significance (N) | 1 | 2 | Nonsynonymous SNV | HET | rs779234032 | 0 | 0 | B | D | N | |
| c.325G >T:p.A109S | Uncertain significance (N) | 2 | 2 | Nonsynonymous SNV | HET | rs748146945 | 5.22E-04 | 0.0003 | B | D | N |
PVS1: predicted null variant in a gene where loss of function (LOF) is a known mechanism of disease. PM2: absent in population databases. PM4: protein length changing variant. PP3: multiple lines of computational evidence support a deleterious effect on the gene/gene product. BP4: multiple lines of computational evidence suggest no impact on gene/gene product. Uncertain significance (N): does not meet any ACMG standards. Polyphen2 (D: probably damaging, P: possibly damaging; B: benign). MutTaster (D: disease causing; N: polymorphism). Provean (D: deleterious SNV; N: neutral). gnomAD_genomeEAS: frequency in the East Asian population of Genome Aggregation Database dataset; ExACEAS: frequency in East Asia population of the Exome Aggregation Consortium (ExAC) database; HET: heterozygous; HOM: homozygous; NA: not available; SNV: single nucleotide variant.
Figure 3The multiple sequence alignment and 3D models of the mutant protein structures. (A) The multiple sequence alignment of the gelsolin protein among vertebrates (amino acid residues 1–400); The degree of conservation between sequences was showed in different colors (identical: bule, strong: green, weak: yellow, non-matching: white). (B) The multiple sequence alignment of the gelsolin protein, K346fs and P3fs mutant gelsolin protein (amino acid residues 1–400). (C) 3D model of the wild-type gelsolin. (D) 3D model of the mutant protein with K346fs mutation, which is similar to part of the wild-type gelsolin (yellow box in C). (E) 3D model of the mutant protein with P3fs mutation.
Figure 1The gelsolin (GSN) gene mutation sequencing diagram and patients’ imaging. (A) The sequencing diagram of case 1 (GSN:c.1036delA:p.K346). (B) The sequencing diagram of case 2 (GSN:c.8_35del:p.P3fs). (C) The sequencing diagram of case 3 (GSN:c.8_35del:p.P3fs). (D) The sequencing diagram of case 4 (GSN:c.8_35del:p.P3fs). (E) The sequencing diagram of case 5 (GSN:c.8_35del:p.P3fs). (F) The magnetic resonance imaging (MRI) of case 4 with P3fs mutation. (G) The MRI, FDG-PET and PIB-PET of case 1 with K346fs mutation. (H) The MRI, FDG-PET and PIB-PET of case 5 with P3fs mutation).
Information of five patients with mutations in the GSN gene.
| Case 1 | Case 2 | Case 3 | Case 4 | Case 5 | |
|---|---|---|---|---|---|
| Mutation | K346fs | P3fs | P3fs | P3fs | P3fs |
| Gender | Female | Female | Male | Male | Female |
| Onset age | 48 | 77 | 69 | 66 | 66 |
| Visiting ages | 50 | 80 | 75 | 68 | 67 |
| Course (years) | 4 | 12 | 14 | 8 | 3 |
| First symptoms | Memory decline | Memory decline | Memory decline | Memory decline | Memory decline |
| Additional symptoms | Behavioral and Psychological symptoms | Behavioral and Psychological symptoms | Behavior change | Behavior change | No |
| Past medical history | Coronary heart disease | Cerebral infarction, hypertension, rhinitis, left inguinal hernia | Hypertension, hyperlipidemia, diabetes | Headache, numbness of the limbs, patent foramen ovale | |
| Family history | No | No | No | No | No |
| APOE | ε3/ε4 | ε3/ε3 | ε3/ε3 | ε3/ε3 | ε3/ε4 |
| Cognitive Assessment | |||||
| MMSE | 9/30 | 9/30 | 0/30 | 18/30 | 23/30 |
| MoCA | 2/30 | 8/30 | 0/30 | 14/30 | 15/30 |
| ADL | 37 | 61 | - | - | 23 |
| NPI | 6 | - | - | - | 7 |
| CDR | 2 | - | - | - | 0.5 |
| MRI | Mild leukoencephalopathy and brain atrophy ( | - | - | Multiple lacunar infarction in the brain, leukoencephalopathy, brain atrophy ( | Mild brain atrophy and mild leukoencephalopathy ( |
Figure 2Distribution of mutations in the GSN gene in different domains of gelsolin protein (Gelsolin protein has six domains, named G1 to G6).
Pathogenic mutations in the GSN gene in worldwide.
| Mutation | Area | Disease | Pathogenic protein deposition | Clinical manifestations |
|---|---|---|---|---|
| P3fs* | China | AD | Not known, maybe brain | Cognitive dysfunction, mild peripheral neurological symptoms, no eye or skin symptoms. |
| A34fs | China (Feng et al., | Atypical FAF | Not known, maybe brain and cerebral vessels. | Seizures and brain lesions. no skin, or eye symptoms. |
| G194R | USA (Sethi et al., | Gelsolin-related renal amyloidosis | Kidney | Chronic kidney disease and anemia. |
| N211K | USA (Efebera et al., | Gelsolin-related renal amyloidosis | Kidney | Nephrotic range proteinuria of 13.2 g/day as the only presenting symptom. |
| D214N/Y | Finland (Hiltunen et al., | FAF | Eye, nerve, and skin | The main clinical manifestations are corneal lattice dystrophy, cranial neuropathy, peripheral neuropathy and cutis laxa. in East Asia (Japan and Korea), the clinical manifestations of FAF were mainly neurological symptoms. |
| K346fs* | China | AD | Not known, maybe brain | Cognitive dysfunction, personality changes, psychiatric symptoms, symptoms in multiple systems of the body (eyes, skin and thyroid). |
| P459R | USA (African descent; Oregel et al., | Atypical FAF | Muscle tissue | Cranial nerve palsy (facial nerve) and proximal muscle weakness, then dead due to unexplained dyspnea and severe sepsis. The MRI of the head and spinal cord was normal. Biopsy of left quadriceps femoris biopsy showed focal myopathy and denervation atrophy (severe, type II). |
| A578P | USA (Sridharan et al., | ATTR (transthyretin amyloidosis) | Myocardium (amyloid deposition); abdominal fat and rectum mucosa (gelsolin deposition). | Combination with V122I mutation of the |
*Novel mutation.