Literature DB >> 33190424

Data mining combined with experiments to validate CEP55 as a prognostic biomarker in colorectal cancer.

Kang Lin1, Xiaojian Zhu2, Chen Luo1, Fanqin Bu1, Jinfeng Zhu1, Zhengming Zhu1.   

Abstract

INTRODUCTION: Colorectal cancer (CRC) is a common tumor with high morbidity and mortality. Current specific diagnosis regarding CRC remains complicated and costly, and specific diagnostic biomarkers are lacking.
METHODS: To find potential diagnostic and prognostic biomarkers for CRC, we screened and analyzed many CRC sequencing data by The Cancer Genome Atlas Program and Gene Expression Omnibus, and validated that CEP55 may be a potential diagnostic biomarker for CRC by molecular cytological experiments and immunohistochemistry, among others.
RESULTS: We found that CEP55 is upregulated in CRC tissues and tumor cells and can promote CRC proliferation and metastasis by activating the p53/p21 axis and that CEP55 mutations in tumor patients result in worse overall survival and disease-free survival time. Besides, we also found that genes, such as CDK1, CCNB1, NEK2, KIF14, CDCA5, and RFC3 were upregulated in tumors, and their mutations would affect the prognosis of CRC patients, but these results await for more experimental evidence.
CONCLUSION: Our study validates CEP55 as a potential diagnostic and prognostic biomarker for CRC, and we also provide multiple genes and potential molecular mechanisms that may serve as diagnostic and prognostic markers for CRC.
© 2020 The Authors. Immunity, Inflammation and Disease published by John Wiley & Sons Ltd.

Entities:  

Keywords:  CEP55; bioinformatics analysis; biomarkers; colorectal cancer; p53/p21 axis; prognosis

Mesh:

Substances:

Year:  2020        PMID: 33190424      PMCID: PMC7860595          DOI: 10.1002/iid3.375

Source DB:  PubMed          Journal:  Immun Inflamm Dis        ISSN: 2050-4527


  64 in total

1.  Gene Expression Omnibus: NCBI gene expression and hybridization array data repository.

Authors:  Ron Edgar; Michael Domrachev; Alex E Lash
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal.

Authors:  Jianjiong Gao; Bülent Arman Aksoy; Ugur Dogrusoz; Gideon Dresdner; Benjamin Gross; S Onur Sumer; Yichao Sun; Anders Jacobsen; Rileen Sinha; Erik Larsson; Ethan Cerami; Chris Sander; Nikolaus Schultz
Journal:  Sci Signal       Date:  2013-04-02       Impact factor: 8.192

Review 3.  The TP53 colorectal cancer international collaborative study on the prognostic and predictive significance of p53 mutation: influence of tumor site, type of mutation, and adjuvant treatment.

Authors:  Antonio Russo; Viviana Bazan; Barry Iacopetta; David Kerr; Thierry Soussi; Nicola Gebbia
Journal:  J Clin Oncol       Date:  2005-09-19       Impact factor: 44.544

Review 4.  P53 mutations in colorectal cancer - molecular pathogenesis and pharmacological reactivation.

Authors:  Xiao-Lan Li; Jianbiao Zhou; Zhi-Rong Chen; Wee-Joo Chng
Journal:  World J Gastroenterol       Date:  2015-01-07       Impact factor: 5.742

5.  Progressive activation of CyclinB1-Cdk1 coordinates entry to mitosis.

Authors:  Olivier Gavet; Jonathon Pines
Journal:  Dev Cell       Date:  2010-04-20       Impact factor: 12.270

Review 6.  Epidermal growth factor receptor in relation to tumor development: EGFR gene and cancer.

Authors:  Tetsuya Mitsudomi; Yasushi Yatabe
Journal:  FEBS J       Date:  2009-11-18       Impact factor: 5.542

7.  Proportion and number of cancer cases and deaths attributable to potentially modifiable risk factors in the United States.

Authors:  Farhad Islami; Ann Goding Sauer; Kimberly D Miller; Rebecca L Siegel; Stacey A Fedewa; Eric J Jacobs; Marjorie L McCullough; Alpa V Patel; Jiemin Ma; Isabelle Soerjomataram; W Dana Flanders; Otis W Brawley; Susan M Gapstur; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2017-11-21       Impact factor: 508.702

8.  Overexpression of the Nek2 kinase in colorectal cancer correlates with beta-catenin relocalization and shortened cancer-specific survival.

Authors:  Christopher P Neal; Andrew M Fry; Catherine Moreman; Angus McGregor; Giuseppe Garcea; David P Berry; Margaret M Manson
Journal:  J Surg Oncol       Date:  2014-07-16       Impact factor: 3.454

9.  Cell division cycle associated 5 promotes colorectal cancer progression by activating the ERK signaling pathway.

Authors:  Aling Shen; Liya Liu; Hongwei Chen; Fei Qi; Yue Huang; Jiumao Lin; Thomas Joseph Sferra; Senthilkumar Sankararaman; Lihui Wei; Jianfeng Chu; Youqin Chen; Jun Peng
Journal:  Oncogenesis       Date:  2019-02-26       Impact factor: 7.485

10.  Systematic cancer-testis gene expression analysis identified CDCA5 as a potential therapeutic target in esophageal squamous cell carcinoma.

Authors:  Jing Xu; Chengxiang Zhu; Yue Yu; Weibing Wu; Jing Cao; Zhihua Li; Juncheng Dai; Cheng Wang; Yu Tang; Quan Zhu; Jun Wang; Wei Wen; Lei Xue; Fuxi Zhen; Jinyuan Liu; Chenjun Huang; Fei Zhao; Yue Zhou; Zhicheng He; Xianglong Pan; Haixing Wei; Yining Zhu; Yaozhou He; Jun Que; Jinghua Luo; Liang Chen; Wei Wang
Journal:  EBioMedicine       Date:  2019-07-16       Impact factor: 8.143

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  4 in total

1.  An Integrative Human Pan-Cancer Analysis of Cyclin-Dependent Kinase 1 (CDK1).

Authors:  Xuanyou Liu; Hao Wu; Zhenguo Liu
Journal:  Cancers (Basel)       Date:  2022-05-27       Impact factor: 6.575

Review 2.  Colorectal Cancer Diagnosis: The Obstacles We Face in Determining a Non-Invasive Test and Current Advances in Biomarker Detection.

Authors:  Faddy Kamel; Khadiga Eltarhoni; Pasha Nisar; Mikhail Soloviev
Journal:  Cancers (Basel)       Date:  2022-04-08       Impact factor: 6.575

3.  Data mining combined with experiments to validate CEP55 as a prognostic biomarker in colorectal cancer.

Authors:  Kang Lin; Xiaojian Zhu; Chen Luo; Fanqin Bu; Jinfeng Zhu; Zhengming Zhu
Journal:  Immun Inflamm Dis       Date:  2020-11-15

Review 4.  Role of Stress-Survival Pathways and Transcriptomic Alterations in Progression of Colorectal Cancer: A Health Disparities Perspective.

Authors:  Urbashi Basnet; Abhijeet R Patil; Aditi Kulkarni; Sourav Roy
Journal:  Int J Environ Res Public Health       Date:  2021-05-21       Impact factor: 3.390

  4 in total

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