Literature DB >> 33135680

Through-grid wicking enables high-speed cryoEM specimen preparation.

Yong Zi Tan1, John L Rubinstein1.   

Abstract

Blotting times for conventional cryoEM specimen preparation complicate time-resolved studies and lead to some specimens adopting preferred orientations or denaturing at the air-water interface. Here, it is shown that solution sprayed onto one side of a holey cryoEM grid can be wicked through the grid by a glass-fiber filter held against the opposite side, often called the `back', of the grid, producing a film suitable for vitrification. This process can be completed in tens of milliseconds. Ultrasonic specimen application and through-grid wicking were combined in a high-speed specimen-preparation device that was named `Back-it-up' or BIU. The high liquid-absorption capacity of the glass fiber compared with self-wicking grids makes the method relatively insensitive to the amount of sample applied. Consequently, through-grid wicking produces large areas of ice that are suitable for cryoEM for both soluble and detergent-solubilized protein complexes. The speed of the device increases the number of views for a specimen that suffers from preferred orientations.

Entities:  

Keywords:  Back-it-up; cryoEM; specimen preparation

Mesh:

Substances:

Year:  2020        PMID: 33135680     DOI: 10.1107/S2059798320012474

Source DB:  PubMed          Journal:  Acta Crystallogr D Struct Biol        ISSN: 2059-7983            Impact factor:   7.652


  8 in total

Review 1.  Understanding the invisible hands of sample preparation for cryo-EM.

Authors:  Giulia Weissenberger; Rene J M Henderikx; Peter J Peters
Journal:  Nat Methods       Date:  2021-05-07       Impact factor: 47.990

2.  IceBreaker: Software for high-resolution single-particle cryo-EM with non-uniform ice.

Authors:  Mateusz Olek; Kevin Cowtan; Donovan Webb; Yuriy Chaban; Peijun Zhang
Journal:  Structure       Date:  2022-02-11       Impact factor: 5.871

3.  Optimized cryo-EM data-acquisition workflow by sample-thickness determination.

Authors:  Jan Rheinberger; Gert Oostergetel; Guenter P Resch; Cristina Paulino
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-04-27       Impact factor: 7.652

4.  Macromolecular crystallography using microcrystal electron diffraction.

Authors:  Max T B Clabbers; Hongyi Xu
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-02-17       Impact factor: 7.652

5.  A cryo-electron microscopy support film formed by 2D crystals of hydrophobin HFBI.

Authors:  Hongcheng Fan; Bo Wang; Yan Zhang; Yun Zhu; Bo Song; Haijin Xu; Yujia Zhai; Mingqiang Qiao; Fei Sun
Journal:  Nat Commun       Date:  2021-12-14       Impact factor: 14.919

6.  Effects of chameleon dispense-to-plunge speed on particle concentration, complex formation, and final resolution: A case study using the Neisseria gonorrhoeae ribonucleotide reductase inactive complex.

Authors:  Talya S Levitz; Edward J Brignole; Ivan Fong; Michele C Darrow; Catherine L Drennan
Journal:  J Struct Biol       Date:  2021-12-11       Impact factor: 2.867

7.  Need for Speed: Examining Protein Behavior during CryoEM Grid Preparation at Different Timescales.

Authors:  David P Klebl; Molly S C Gravett; Dimitrios Kontziampasis; David J Wright; Robin S Bon; Diana C F Monteiro; Martin Trebbin; Frank Sobott; Howard D White; Michele C Darrow; Rebecca F Thompson; Stephen P Muench
Journal:  Structure       Date:  2020-08-18       Impact factor: 5.006

8.  Cryo-EM single-particle structure refinement and map calculation using Servalcat.

Authors:  Keitaro Yamashita; Colin M Palmer; Tom Burnley; Garib N Murshudov
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-09-29       Impact factor: 7.652

  8 in total

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