Literature DB >> 33645535

Macromolecular crystallography using microcrystal electron diffraction.

Max T B Clabbers1, Hongyi Xu1.   

Abstract

Microcrystal electron diffraction (MicroED) has recently emerged as a promising method for macromolecular structure determination in structural biology. Since the first protein structure was determined in 2013, the method has been evolving rapidly. Several protein structures have been determined and various studies indicate that MicroED is capable of (i) revealing atomic structures with charges, (ii) solving new protein structures by molecular replacement, (iii) visualizing ligand-binding interactions and (iv) determining membrane-protein structures from microcrystals embedded in lipidic mesophases. However, further development and optimization is required to make MicroED experiments more accurate and more accessible to the structural biology community. Here, we provide an overview of the current status of the field, and highlight the ongoing development, to provide an indication of where the field may be going in the coming years. We anticipate that MicroED will become a robust method for macromolecular structure determination, complementing existing methods in structural biology. open access.

Entities:  

Keywords:  3D electron diffraction; electron crystallography; macromolecular crystallography; methods development; microcrystal electron diffraction

Year:  2021        PMID: 33645535      PMCID: PMC7919406          DOI: 10.1107/S2059798320016368

Source DB:  PubMed          Journal:  Acta Crystallogr D Struct Biol        ISSN: 2059-7983            Impact factor:   7.652


  119 in total

Review 1.  Review: electron crystallography: present excitement, a nod to the past, anticipating the future.

Authors:  R M Glaeser
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Structure and bonding in alpha-copper phthalocyanine by electron diffraction.

Authors:  J S Wu; J C H Spence
Journal:  Acta Crystallogr A       Date:  2003-08-29       Impact factor: 2.290

3.  Molecular replacement with MOLREP.

Authors:  Alexei Vagin; Alexei Teplyakov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

Review 4.  High-resolution electron crystallography of protein molecules.

Authors:  R M Glaeser; K H Downing
Journal:  Ultramicroscopy       Date:  1993-12       Impact factor: 2.689

5.  Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery.

Authors:  Alan Merk; Alberto Bartesaghi; Soojay Banerjee; Veronica Falconieri; Prashant Rao; Mindy I Davis; Rajan Pragani; Matthew B Boxer; Lesley A Earl; Jacqueline L S Milne; Sriram Subramaniam
Journal:  Cell       Date:  2016-05-26       Impact factor: 41.582

6.  The minimum crystal size needed for a complete diffraction data set.

Authors:  James M Holton; Kenneth A Frankel
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals.

Authors:  Igor Nederlof; Eric van Genderen; Yao Wang Li; Jan Pieter Abrahams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-15

8.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM.

Authors:  Ricardo D Righetto; Nikhil Biyani; Julia Kowal; Mohamed Chami; Henning Stahlberg
Journal:  Nat Commun       Date:  2019-04-12       Impact factor: 14.919

10.  Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp.

Authors:  Marcus Gallagher-Jones; Calina Glynn; David R Boyer; Michael W Martynowycz; Evelyn Hernandez; Jennifer Miao; Chih-Te Zee; Irina V Novikova; Lukasz Goldschmidt; Heather T McFarlane; Gustavo F Helguera; James E Evans; Michael R Sawaya; Duilio Cascio; David S Eisenberg; Tamir Gonen; Jose A Rodriguez
Journal:  Nat Struct Mol Biol       Date:  2018-01-15       Impact factor: 15.369

View more
  3 in total

1.  DIALS as a toolkit.

Authors:  Graeme Winter; James Beilsten-Edmands; Nicholas Devenish; Markus Gerstel; Richard J Gildea; David McDonagh; Elena Pascal; David G Waterman; Benjamin H Williams; Gwyndaf Evans
Journal:  Protein Sci       Date:  2021-11-24       Impact factor: 6.993

Review 2.  Protein Lipidation Types: Current Strategies for Enrichment and Characterization.

Authors:  Rong Wang; Yong Q Chen
Journal:  Int J Mol Sci       Date:  2022-02-21       Impact factor: 5.923

Review 3.  Metalloprotein catalysis: structural and mechanistic insights into oxidoreductases from neutron protein crystallography.

Authors:  Gabriela C Schröder; Flora Meilleur
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-09-27       Impact factor: 7.652

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.