| Literature DB >> 33126630 |
Huda R M Rashdan1, Aboubakr H Abdelmonsef2, Ihsan A Shehadi3, Sobhi M Gomha4,5, Abdel Mohsen M Soliman6, Huda K Mahmoud4.
Abstract
BACKGROUND: Imidazo[2,1-b]thiazole scaffolds were reported to possess various pharmaceutical activities.Entities:
Keywords: anti-proliferative activity; hydrazonoylhalides; imidazo[2,1-b]thiazole; molecular docking studies; thiadiazoles
Mesh:
Substances:
Year: 2020 PMID: 33126630 PMCID: PMC7663531 DOI: 10.3390/molecules25214997
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1Synthesis of methyl dithioate derivative 3.
Scheme 2Synthesis of thiadiazole derivatives 6a–i.
Scheme 3Synthesis of bis-thiadiazole derivatives 10–12.
Anti-proliferative activity of new derivatives towards hepatic cancer and normal cell lines.
| Compound | HepG2 IC50 ± SD[µg/mL] | BALAB/3T3 IC50 ± SD[µg/mL] |
|---|---|---|
|
| 3.56 ± 0.46 | 3.21 ± 0.32 |
|
| Nd | Nd |
|
| 63.32 ± 12.83 | 25.09 ± 12.00 |
|
| 59.20 ± 9.27 | Nd |
|
| Nd | Nd |
|
| 41.14 ± 8.32 | Nd |
|
| Nd | Nd |
|
| 57.52 ± 6.61 | Nd |
|
| 33.24 ± 8.25 | 76.72 ± 4.14 |
|
| Nd | Nd |
|
| 19.93 ± 3.28 | 35.65 ± 1.27 |
|
| 23.51 ± 4.48 | 26.24 ± 3.21 |
|
| Nd | Nd |
|
| 12.73 ± 1.36 | 8.34 ± 1.81 |
Compounds were tested in concentration from 100 to 0.1 µg/mL; Nd: no detectable activity in the used concentrations; Concentration of DMSO: 1%.
The binding affinity (kcal·mol−1) of various compounds 3–12 and reference drug with the target after molecular docking.
| Structure | Binding Affinity (kcal·mol−1) | Docked Complex (Amino Acid–Ligand) Interactions | Distance (Å) | |
|---|---|---|---|---|
| Ref. |
| −8.60 | H-bonds | |
|
|
| −6.90 | π-cation interactions | |
|
|
| −9.40 | H-bonds | |
|
|
| −9.11 | H-bonds | |
|
|
| −8.17 | H-bonds | |
|
|
| −8.15 | H-bonds | |
|
|
| −8.11 | H-bonds | |
|
|
| −7.91 | H-bonds | |
|
|
| −9.30 | π-π interactions | |
|
|
| −8.52 | H-bonds | |
|
|
| −9.03 | π-π interactions | |
|
|
| −9.52 | π-π interactions | |
|
|
| −9.01 | π-π interactions | |
|
|
| −10.30 | π-π interactions |
Figure 1Intermolecular interactions between the best docked molecules (10 and 12) and GPC-3 protein. (Left) 3-Dimensional representation of GPC3-ligand complexes. The binding residues are shown in cyan stick and the hydrogen bonds in Å are represented in green dotted lines. π-interactions are shown in blue lines. The ligand molecules are shown in yellow stick model. (Right) 2-Dimensional representation; the amino acids are shown in 3 letter code, and H-bonds in green dotted lines. π-interactions are shown in blue lines.
List of ADMET properties of the newly synthesized molecules (3–12).
| Blood-Brain Barrier (BBB+) | Human Intestinal | Caco-2 Permeability (Caco2+) | AMES Toxicity | Carcino-Genicity | |
|---|---|---|---|---|---|
|
| 0.726 | 0.992 | 0.535 | Nontoxic | Non carcinogenic |
|
| 0.898 | 1 | 0.559 | Nontoxic | Non carcinogenic |
|
| 0.907 | 1 | 0.55 | Nontoxic | Non carcinogenic |
|
| 0.872 | 1 | 0.541 | Nontoxic | Non carcinogenic |
|
| 0.884 | 1 | 0.53 | Nontoxic | Non carcinogenic |
|
| 0.884 | 1 | 0.53 | Nontoxic | Non carcinogenic |
|
| 0.849 | 0.997 | 0.533 | Nontoxic | Non carcinogenic |
|
| 0.857 | 0.996 | 0.556 | Nontoxic | Non carcinogenic |
|
| 0.784 | 0.993 | 0.528 | Nontoxic | Non carcinogenic |
|
| 0.9 | 0.994 | 0.588 | Nontoxic | Non carcinogenic |
|
| 0.9 | 0.994 | 0.588 | Nontoxic | Non carcinogenic |
|
| 0.9 | 0.997 | 0.536 | Nontoxic | Non carcinogenic |
|
| 0.532 | 0.95 | 0.567 | Nontoxic | Non carcinogenic |
Physicochemical properties of the title compounds (3–12).
| TPSA (A2) | HBA | HBD | Volume (A3) | ||
|---|---|---|---|---|---|
|
| 41.70 | 4 | 1 | 5 | 319.26 |
|
| 76.93 | 7 | 0 | 5 | 434.42 |
|
| 86.17 | 8 | 0 | 6 | 443.40 |
|
| 76.93 | 7 | 0 | 5 | 431.39 |
|
| 86.17 | 8 | 0 | 7 | 443.64 |
|
| 86.17 | 8 | 0 | 7 | 460.20 |
|
| 86.17 | 8 | 0 | 7 | 461.53 |
|
| 88.96 | 8 | 1 | 6 | 485.10 |
|
| 134.78 | 10 | 1 | 7 | 508.44 |
|
| 59.86 | 6 | 0 | 5 | 453.72 |
|
| 119.72 | 10 | 0 | 10 | 823.39 |
|
| 153.68 | 10 | 0 | 10 | 751.66 |
|
| 155.01 | 10 | 0 | 12 | 854.50 |
TPSA, topological polar surface area; HBA, number of hydrogen bond acceptors; HBD, number of hydrogen bond donors; n rotatable, number of rotatable bonds.