Literature DB >> 33104214

RNF219 interacts with CCR4-NOT in regulating stem cell differentiation.

Hao Du1, Chen Chen1, Yan Wang1, Yang Yang2, Zhuanzhuan Che1, Xiaoxu Liu1, Siyan Meng1, Chenghao Guo1, Manman Xu1, Haitong Fang1, Fengchao Wang3, Chengqi Lin1,4, Zhuojuan Luo1,4.   

Abstract

Regulation of RNA stability plays a crucial role in gene expression control. Deadenylation is the initial rate-limiting step for the majority of RNA decay events. Here, we show that RING finger protein 219 (RNF219) interacts with the CCR4-NOT deadenylase complex. RNF219-CCR4-NOT exhibits deadenylation activity in vitro. RNA-seq analyses identify some of the 2-cell-specific genes and the neuronal genes significantly downregulated upon RNF219 knockdown, while upregulated after depletion of the CCR4-NOT subunit CNOT10 in mouse embryonic stem (ES) cells. RNF219 depletion leads to impaired neuronal lineage commitment during ES cell differentiation. Our study suggests that RNF219 is a novel interacting partner of CCR4-NOT and required for maintenance of ES cell pluripotency.
© The Author(s) (2020). Published by Oxford University Press on behalf of Journal of Molecular Cell Biology, IBCB, SIBS, CAS.

Entities:  

Keywords:  CCR4–NOT; RNF219; deadenylation; protein complex; stem cell differentiation

Mesh:

Substances:

Year:  2020        PMID: 33104214      PMCID: PMC7883825          DOI: 10.1093/jmcb/mjaa061

Source DB:  PubMed          Journal:  J Mol Cell Biol        ISSN: 1759-4685            Impact factor:   6.216


  43 in total

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Authors:  Joerg E Braun; Eric Huntzinger; Maria Fauser; Elisa Izaurralde
Journal:  Mol Cell       Date:  2011-10-07       Impact factor: 17.970

2.  featureCounts: an efficient general purpose program for assigning sequence reads to genomic features.

Authors:  Yang Liao; Gordon K Smyth; Wei Shi
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3.  The multifunctional Ccr4-Not complex directly promotes transcription elongation.

Authors:  Jennifer A Kruk; Arnob Dutta; Jianhua Fu; David S Gilmour; Joseph C Reese
Journal:  Genes Dev       Date:  2011-03-15       Impact factor: 11.361

4.  Opposing polymerase-deadenylase activities regulate cytoplasmic polyadenylation.

Authors:  Jong Heon Kim; Joel D Richter
Journal:  Mol Cell       Date:  2006-10-20       Impact factor: 17.970

5.  Recruitment and activation of mRNA decay enzymes by two ARE-mediated decay activation domains in the proteins TTP and BRF-1.

Authors:  Jens Lykke-Andersen; Eileen Wagner
Journal:  Genes Dev       Date:  2005-02-01       Impact factor: 11.361

6.  The super elongation complex family of RNA polymerase II elongation factors: gene target specificity and transcriptional output.

Authors:  Zhuojuan Luo; Chengqi Lin; Erin Guest; Alexander S Garrett; Nima Mohaghegh; Selene Swanson; Stacy Marshall; Laurence Florens; Michael P Washburn; Ali Shilatifard
Journal:  Mol Cell Biol       Date:  2012-04-30       Impact factor: 4.272

7.  Elucidating MicroRNA Regulatory Networks Using Transcriptional, Post-transcriptional, and Histone Modification Measurements.

Authors:  Sara J C Gosline; Allan M Gurtan; Courtney K JnBaptiste; Andrew Bosson; Pamela Milani; Simona Dalin; Bryan J Matthews; Yoon S Yap; Phillip A Sharp; Ernest Fraenkel
Journal:  Cell Rep       Date:  2015-12-31       Impact factor: 9.423

8.  PABP Cooperates with the CCR4-NOT Complex to Promote mRNA Deadenylation and Block Precocious Decay.

Authors:  Hyerim Yi; Joha Park; Minju Ha; Jaechul Lim; Hyeshik Chang; V Narry Kim
Journal:  Mol Cell       Date:  2018-06-21       Impact factor: 17.970

9.  miRNA repression involves GW182-mediated recruitment of CCR4-NOT through conserved W-containing motifs.

Authors:  Marina Chekulaeva; Hansruedi Mathys; Jakob T Zipprich; Jan Attig; Marija Colic; Roy Parker; Witold Filipowicz
Journal:  Nat Struct Mol Biol       Date:  2011-10-07       Impact factor: 15.369

10.  Protein Degradation of RNA Polymerase II-Association Factor 1(PAF1) Is Controlled by CNOT4 and 26S Proteasome.

Authors:  Hwa-Young Sun; Nari Kim; Cheol-Sang Hwang; Joo-Yeon Yoo
Journal:  PLoS One       Date:  2015-05-01       Impact factor: 3.240

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  3 in total

1.  RNF219 regulates CCR4-NOT function in mRNA translation and deadenylation.

Authors:  Aude Guénolé; Fabien Velilla; Aymeric Chartier; April Rich; Anne-Ruxandra Carvunis; Claude Sardet; Martine Simonelig; Bijan Sobhian
Journal:  Sci Rep       Date:  2022-06-03       Impact factor: 4.996

2.  RNF219 attenuates global mRNA decay through inhibition of CCR4-NOT complex-mediated deadenylation.

Authors:  Fabian Poetz; Joshua Corbo; Yevgen Levdansky; Alexander Spiegelhalter; Doris Lindner; Vera Magg; Svetlana Lebedeva; Jörg Schweiggert; Johanna Schott; Eugene Valkov; Georg Stoecklin
Journal:  Nat Commun       Date:  2021-12-09       Impact factor: 14.919

3.  The N6-methyladenosine modification enhances ferroptosis resistance through inhibiting SLC7A11 mRNA deadenylation in hepatoblastoma.

Authors:  Li Liu; Jiangtu He; Guifeng Sun; Nan Huang; Zhixuan Bian; Chang Xu; Yue Zhang; Zhongqi Cui; Wenqiang Xu; Fenyong Sun; Chengle Zhuang; Qiuhong Man; Song Gu
Journal:  Clin Transl Med       Date:  2022-05
  3 in total

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