Literature DB >> 15687258

Recruitment and activation of mRNA decay enzymes by two ARE-mediated decay activation domains in the proteins TTP and BRF-1.

Jens Lykke-Andersen1, Eileen Wagner.   

Abstract

In human cells, a critical pathway in gene regulation subjects mRNAs with AU-rich elements (AREs) to rapid decay by a poorly understood process. AREs have been shown to directly activate deadenylation, decapping, or 3'-to-5' exonucleolytic decay. We demonstrate that enzymes involved in all three of these mRNA decay processes, as well as 5'-to-3' exonucleolytic decay, associate with the protein tristetraprolin (TTP) and its homolog BRF-1, which bind AREs and activate mRNA decay. TTP and BRF-1 each contain two activation domains that can activate mRNA decay after fusion to a heterologous RNA-binding protein, and inhibit ARE-mediated mRNA decay when overexpressed. Both activation domains employ trans-acting factors to trigger mRNA decay, and the N-terminal activation domain functions as a binding platform for mRNA decay enzymes. Our data suggest that the TTP protein family functions as a molecular link between ARE-containing mRNAs and the mRNA decay machinery by recruitment of mRNA decay enzymes, and help explain how deadenylation, decapping, and exonucleolytic decay can all be independently activated on ARE-containing mRNAs. This describes a potentially regulated step in activation of mRNA decay.

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Year:  2005        PMID: 15687258      PMCID: PMC546513          DOI: 10.1101/gad.1282305

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  50 in total

1.  ARED: human AU-rich element-containing mRNA database reveals an unexpectedly diverse functional repertoire of encoded proteins.

Authors:  T Bakheet; M Frevel; B R Williams; W Greer; K S Khabar
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

Review 2.  The cap-to-tail guide to mRNA turnover.

Authors:  C J Wilusz; M Wormington; S W Peltz
Journal:  Nat Rev Mol Cell Biol       Date:  2001-04       Impact factor: 94.444

3.  Targeting an mRNA for decapping: displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs.

Authors:  S Tharun; R Parker
Journal:  Mol Cell       Date:  2001-11       Impact factor: 17.970

4.  Versatile role for hnRNP D isoforms in the differential regulation of cytoplasmic mRNA turnover.

Authors:  N Xu; C Y Chen; A B Shyu
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

5.  Interactions of CCCH zinc finger proteins with mRNA: tristetraprolin-mediated AU-rich element-dependent mRNA degradation can occur in the absence of a poly(A) tail.

Authors:  W S Lai; P J Blackshear
Journal:  J Biol Chem       Date:  2001-03-28       Impact factor: 5.157

6.  AU binding proteins recruit the exosome to degrade ARE-containing mRNAs.

Authors:  C Y Chen; R Gherzi; S E Ong; E L Chan; R Raijmakers; G J Pruijn; G Stoecklin; C Moroni; M Mann; M Karin
Journal:  Cell       Date:  2001-11-16       Impact factor: 41.582

7.  A novel mRNA-decapping activity in HeLa cytoplasmic extracts is regulated by AU-rich elements.

Authors:  M Gao; C J Wilusz; S W Peltz; J Wilusz
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

8.  Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon.

Authors:  J Lykke-Andersen; M D Shu; J A Steitz
Journal:  Cell       Date:  2000-12-22       Impact factor: 41.582

9.  Functional link between the mammalian exosome and mRNA decapping.

Authors:  Z Wang; M Kiledjian
Journal:  Cell       Date:  2001-12-14       Impact factor: 41.582

10.  Interactions of CCCH zinc finger proteins with mRNA. Binding of tristetraprolin-related zinc finger proteins to Au-rich elements and destabilization of mRNA.

Authors:  W S Lai; E Carballo; J M Thorn; E A Kennington; P J Blackshear
Journal:  J Biol Chem       Date:  2000-06-09       Impact factor: 5.157

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  230 in total

Review 1.  The roles of TTP and BRF proteins in regulated mRNA decay.

Authors:  Sandhya Sanduja; Fernando F Blanco; Dan A Dixon
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Jan-Feb       Impact factor: 9.957

2.  Evaluating posttranscriptional regulation of cytokine genes.

Authors:  Bernd Rattenbacher; Paul R Bohjanen
Journal:  Methods Mol Biol       Date:  2012

3.  Direct binding of specific AUF1 isoforms to tandem zinc finger domains of tristetraprolin (TTP) family proteins.

Authors:  Vishram P Kedar; Beth E Zucconi; Gerald M Wilson; Perry J Blackshear
Journal:  J Biol Chem       Date:  2011-12-27       Impact factor: 5.157

4.  mRNA degradation plays a significant role in the program of gene expression regulated by phosphatidylinositol 3-kinase signaling.

Authors:  Julie R Graham; Melissa C Hendershott; Jolyon Terragni; Geoffrey M Cooper
Journal:  Mol Cell Biol       Date:  2010-09-20       Impact factor: 4.272

Review 5.  To polyadenylate or to deadenylate: that is the question.

Authors:  Xiaokan Zhang; Anders Virtanen; Frida E Kleiman
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

Review 6.  Inflammation: cytokines and RNA-based regulation.

Authors:  Deborah J Stumpo; Wi S Lai; Perry J Blackshear
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-05-06       Impact factor: 9.957

7.  Multiple mRNA decapping enzymes in mammalian cells.

Authors:  Man-Gen Song; You Li; Megerditch Kiledjian
Journal:  Mol Cell       Date:  2010-11-12       Impact factor: 17.970

8.  Post-transcriptional Regulation of Genes Encoding Anti-microbial Peptides in Drosophila.

Authors:  Aurélien Lauwers; Laure Twyffels; Romuald Soin; Corinne Wauquier; Véronique Kruys; Cyril Gueydan
Journal:  J Biol Chem       Date:  2009-01-28       Impact factor: 5.157

Review 9.  Translating the Untranslated Region.

Authors:  Johannes Schwerk; Ram Savan
Journal:  J Immunol       Date:  2015-10-01       Impact factor: 5.422

10.  Inhibition of the ubiquitin-proteasome system induces stress granule formation.

Authors:  Rachid Mazroui; Sergio Di Marco; Randal J Kaufman; Imed-Eddine Gallouzi
Journal:  Mol Biol Cell       Date:  2007-05-02       Impact factor: 4.138

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