Literature DB >> 21984184

miRNA repression involves GW182-mediated recruitment of CCR4-NOT through conserved W-containing motifs.

Marina Chekulaeva1, Hansruedi Mathys, Jakob T Zipprich, Jan Attig, Marija Colic, Roy Parker, Witold Filipowicz.   

Abstract

miRNA-mediated repression in animals is dependent on the GW182 protein family. GW182 proteins are recruited to the miRNA repression complex through direct interaction with Argonaute proteins, and they function downstream to repress target mRNA. Here we demonstrate that in human and Drosophila melanogaster cells, the critical repressive features of both the N-terminal and C-terminal effector domains of GW182 proteins are Gly/Ser/Thr-Trp (G/S/TW) or Trp-Gly/Ser/Thr (WG/S/T) motifs. These motifs, which are dispersed across both domains and act in an additive manner, function by recruiting components of the CCR4-NOT deadenylation complex. A heterologous yeast polypeptide with engineered WG/S/T motifs acquired the ability to repress tethered mRNA and to interact with the CCR4-NOT complex. These results identify previously unknown effector motifs functioning as important mediators of miRNA-induced silencing in both species, and they reveal that recruitment of the CCR4-NOT complex by tryptophan-containing motifs acts downstream of GW182 to repress mRNAs, including inhibiting translation independently of deadenylation.

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Year:  2011        PMID: 21984184      PMCID: PMC3885283          DOI: 10.1038/nsmb.2166

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  36 in total

Review 1.  The eukaryotic Ccr4-not complex: a regulatory platform integrating mRNA metabolism with cellular signaling pathways?

Authors:  Martine A Collart; H Th Marc Timmers
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2004

2.  A C-terminal silencing domain in GW182 is essential for miRNA function.

Authors:  Ana Eulalio; Sigrun Helms; Christoph Fritzsch; Maria Fauser; Elisa Izaurralde
Journal:  RNA       Date:  2009-04-21       Impact factor: 4.942

3.  CCR4-NOT deadenylates mRNA associated with RNA-induced silencing complexes in human cells.

Authors:  Xianghua Piao; Xue Zhang; Ligang Wu; Joel G Belasco
Journal:  Mol Cell Biol       Date:  2010-01-11       Impact factor: 4.272

4.  Structure/function implications in a dynamic complex of the intrinsically disordered Sic1 with the Cdc4 subunit of an SCF ubiquitin ligase.

Authors:  Tanja Mittag; Joseph Marsh; Alexander Grishaev; Stephen Orlicky; Hong Lin; Frank Sicheri; Mike Tyers; Julie D Forman-Kay
Journal:  Structure       Date:  2010-03-14       Impact factor: 5.006

5.  The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes.

Authors:  J M Coller; M Tucker; U Sheth; M A Valencia-Sanchez; R Parker
Journal:  RNA       Date:  2001-12       Impact factor: 4.942

6.  Disrupting the pairing between let-7 and Hmga2 enhances oncogenic transformation.

Authors:  Christine Mayr; Michael T Hemann; David P Bartel
Journal:  Science       Date:  2007-02-22       Impact factor: 47.728

7.  The GW/WG repeats of Drosophila GW182 function as effector motifs for miRNA-mediated repression.

Authors:  Marina Chekulaeva; Roy Parker; Witold Filipowicz
Journal:  Nucleic Acids Res       Date:  2010-06-08       Impact factor: 16.971

8.  Staufen- and FMRP-containing neuronal RNPs are structurally and functionally related to somatic P bodies.

Authors:  Scott A Barbee; Patricia S Estes; Anne-Marie Cziko; Jens Hillebrand; Rene A Luedeman; Jeff M Coller; Nick Johnson; Iris C Howlett; Cuiyun Geng; Ryu Ueda; Andrea H Brand; Sarah F Newbury; James E Wilhelm; Richard B Levine; Akira Nakamura; Roy Parker; Mani Ramaswami
Journal:  Neuron       Date:  2006-12-21       Impact factor: 17.173

9.  Translation repression in human cells by microRNA-induced gene silencing requires RCK/p54.

Authors:  Chia-ying Chu; Tariq M Rana
Journal:  PLoS Biol       Date:  2006-07       Impact factor: 8.029

10.  The RRM domain in GW182 proteins contributes to miRNA-mediated gene silencing.

Authors:  Ana Eulalio; Felix Tritschler; Regina Büttner; Oliver Weichenrieder; Elisa Izaurralde; Vincent Truffault
Journal:  Nucleic Acids Res       Date:  2009-03-18       Impact factor: 16.971

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  179 in total

1.  Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish.

Authors:  Yuichiro Mishima; Akira Fukao; Tomoyoshi Kishimoto; Hiroshi Sakamoto; Toshinobu Fujiwara; Kunio Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-09       Impact factor: 11.205

Review 2.  MicroRNAs and their targets: recognition, regulation and an emerging reciprocal relationship.

Authors:  Amy E Pasquinelli
Journal:  Nat Rev Genet       Date:  2012-03-13       Impact factor: 53.242

3.  miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT.

Authors:  Marc R Fabian; Maja K Cieplak; Filipp Frank; Masahiro Morita; Jonathan Green; Tharan Srikumar; Bhushan Nagar; Tadashi Yamamoto; Brian Raught; Thomas F Duchaine; Nahum Sonenberg
Journal:  Nat Struct Mol Biol       Date:  2011-10-07       Impact factor: 15.369

Review 4.  General principals of miRNA biogenesis and regulation in the brain.

Authors:  Dónal O'Carroll; Anne Schaefer
Journal:  Neuropsychopharmacology       Date:  2012-06-06       Impact factor: 7.853

Review 5.  Translational control by changes in poly(A) tail length: recycling mRNAs.

Authors:  Laure Weill; Eulàlia Belloc; Felice-Alessio Bava; Raúl Méndez
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

Review 6.  The mechanics of miRNA-mediated gene silencing: a look under the hood of miRISC.

Authors:  Marc R Fabian; Nahum Sonenberg
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

7.  Elucidating the temporal order of silencing.

Authors:  Elisa Izaurralde
Journal:  EMBO Rep       Date:  2012-06-22       Impact factor: 8.807

Review 8.  P-bodies and stress granules: possible roles in the control of translation and mRNA degradation.

Authors:  Carolyn J Decker; Roy Parker
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-09-01       Impact factor: 10.005

Review 9.  Nanos genes and their role in development and beyond.

Authors:  Evi De Keuckelaere; Paco Hulpiau; Yvan Saeys; Geert Berx; Frans van Roy
Journal:  Cell Mol Life Sci       Date:  2018-02-03       Impact factor: 9.261

10.  Crystal structure and functional properties of the human CCR4-CAF1 deadenylase complex.

Authors:  Ying Chen; Elena Khazina; Elisa Izaurralde; Oliver Weichenrieder
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

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