Literature DB >> 33089583

An experimental method to characterize the relationship between aperture image and ray directions in microscope optics.

Mai Thi Tran1,2, Rudolf Oldenbourg2.   

Abstract

We propose a direct experimental method to calibrate the relationship between ray directions in object space and their positions in the aperture plane of a light field microscope. The calibration improves the interpretation of light field images, which contain information from both types of image planes, the field plane and the aperture plane of the ray path in the microscope. Our method is based on the diffraction of line gratings of known periodicities and provides accurate results with subpixel resolution. The method can be custom-tailored to most any optical configuration, including standard light microscopy setups, whenever correct mapping between ray parameters in the object/image plane and the aperture plane is needed.
© 2020 Wiley Periodicals LLC.

Entities:  

Keywords:  aperture image; birefringence; light field microscope; line grating; microlens array; polarized light; polarized light field microscope

Year:  2020        PMID: 33089583      PMCID: PMC8005462          DOI: 10.1002/jemt.23625

Source DB:  PubMed          Journal:  Microsc Res Tech        ISSN: 1059-910X            Impact factor:   2.769


  8 in total

1.  Fast, volumetric live-cell imaging using high-resolution light-field microscopy.

Authors:  Haoyu Li; Changliang Guo; Deborah Kim-Holzapfel; Weiyi Li; Yelena Altshuller; Bryce Schroeder; Wenhao Liu; Yizhi Meng; Jarrod B French; Ken-Ichi Takamaru; Michael A Frohman; Shu Jia
Journal:  Biomed Opt Express       Date:  2018-12-04       Impact factor: 3.732

2.  Instantaneous isotropic volumetric imaging of fast biological processes.

Authors:  Nils Wagner; Nils Norlin; Jakob Gierten; Gustavo de Medeiros; Bálint Balázs; Joachim Wittbrodt; Lars Hufnagel; Robert Prevedel
Journal:  Nat Methods       Date:  2019-04-29       Impact factor: 28.547

3.  Mapping birefringence in three dimensions using polarized light field microscopy: the case of the juvenile clamshell.

Authors:  M T Tran; R Oldenbourg
Journal:  J Microsc       Date:  2018-06-21       Impact factor: 1.758

4.  Artifact-free deconvolution in light field microscopy.

Authors:  Anca Stefanoiu; Josue Page; Panagiotis Symvoulidis; Gil G Westmeyer; Tobias Lasser
Journal:  Opt Express       Date:  2019-10-28       Impact factor: 3.894

5.  Fourier light-field microscopy.

Authors:  Changliang Guo; Wenhao Liu; Xuanwen Hua; Haoyu Li; Shu Jia
Journal:  Opt Express       Date:  2019-09-02       Impact factor: 3.894

6.  Rapid whole brain imaging of neural activity in freely behaving larval zebrafish (Danio rerio).

Authors:  Lin Cong; Zeguan Wang; Yuming Chai; Wei Hang; Chunfeng Shang; Wenbin Yang; Lu Bai; Jiulin Du; Kai Wang; Quan Wen
Journal:  Elife       Date:  2017-09-20       Impact factor: 8.140

7.  Polarized light field microscopy: an analytical method using a microlens array to simultaneously capture both conoscopic and orthoscopic views of birefringent objects.

Authors:  R Oldenbourg
Journal:  J Microsc       Date:  2008-09       Impact factor: 1.758

8.  Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.

Authors:  Robert Prevedel; Young-Gyu Yoon; Maximilian Hoffmann; Nikita Pak; Gordon Wetzstein; Saul Kato; Tina Schrödel; Ramesh Raskar; Manuel Zimmer; Edward S Boyden; Alipasha Vaziri
Journal:  Nat Methods       Date:  2014-05-18       Impact factor: 28.547

  8 in total

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