Literature DB >> 33086044

Applicability of Styrene-Maleic Acid Copolymer for Two Microbial Rhodopsins, RxR and HsSRI.

Tetsuya Ueta1, Keiichi Kojima1, Tomoya Hino2, Mikihiro Shibata3, Shingo Nagano2, Yuki Sudo4.   

Abstract

The membrane-embedded protein rhodopsin is widely produced in organisms as a photoreceptor showing a variety of light-dependent biological functions. To investigate its molecular features, rhodopsin is often extracted from cellular membrane lipids by a suitable detergent as "micelles." The extracted protein is purified by column chromatography and then is often reconstituted into "liposomes" by removal of the detergent. The styrene-maleic acid ("SMA") copolymer spontaneously forms nanostructures containing lipids without detergent. In this study, we applied SMA to characterize two microbial rhodopsins, a thermally stable rhodopsin, Rubrobacter xylanophilus rhodopsin (RxR), and an unstable one, Halobacterium salinarum sensory rhodopsin I (HsSRI), and evaluated their physicochemical properties in SMA lipid particles compared with rhodopsins in micelles and in liposomes. Those two rhodopsins were produced in Escherichia coli cells and were successfully extracted from the membrane by the addition of SMA (5 w/v %) without losing their visible color. Analysis by dynamic light scattering revealed that RxR in SMA lipid particles (RxR-SMA) formed a discoidal structure with a diameter of 54 nm, which was 10 times smaller than RxR in phosphatidylcholine liposomes. The small particle size of RxR-SMA allowed us to obtain scattering-less visible spectra with a high signal-to-noise ratio similar to RxR in detergent micelles composed of n-dodecyl-β-D-maltoside. High-speed atomic force microscopy revealed that a single particle contained an average of 4.1 trimers of RxR (12.3 monomers). In addition, RxR-SMA showed a fast cyclic photoreaction (k = 13 s-1) comparable with RxR in phosphatidylcholine liposomes (17 s-1) but not to RxR in detergent micelles composed of n-dodecyl-β-D-maltoside (0.59 s-1). By taking advantage of SMA, we determined the dissociation constant (Kd) of chloride for HsSRI as 34 mM. From these results, we conclude that SMA is a useful molecule forming a membrane-mimicking assembly for microbial rhodopsins having the advantages of detergents and liposomes.
Copyright © 2020 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2020        PMID: 33086044      PMCID: PMC7677245          DOI: 10.1016/j.bpj.2020.09.026

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  47 in total

1.  Reconstitution of membrane proteins into liposomes.

Authors:  Jean-Louis Rigaud; Daniel Lévy
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

Review 2.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

Review 3.  Molecular mechanism of photosignaling by archaeal sensory rhodopsins.

Authors:  W D Hoff; K H Jung; J L Spudich
Journal:  Annu Rev Biophys Biomol Struct       Date:  1997

4.  Three-dimensional crystals of membrane proteins: bacteriorhodopsin.

Authors:  H Michel; D Oesterhelt
Journal:  Proc Natl Acad Sci U S A       Date:  1980-03       Impact factor: 11.205

5.  Importance of specific hydrogen bonds of archaeal rhodopsins for the binding to the transducer protein.

Authors:  Yuki Sudo; Masaki Yamabi; Shinnosuke Kato; Chisa Hasegawa; Masayuki Iwamoto; Kazumi Shimono; Naoki Kamo
Journal:  J Mol Biol       Date:  2006-02-03       Impact factor: 5.469

6.  The photocycle and proton translocation pathway in a cyanobacterial ion-pumping rhodopsin.

Authors:  Mylene R M Miranda; Ah Rheum Choi; Lichi Shi; Arandi G Bezerra; Kwang-Hwan Jung; Leonid S Brown
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

7.  Purification of histidine tagged bacteriorhodopsin, pharaonis halorhodopsin and pharaonis sensory rhodopsin II functionally expressed in Escherichia coli.

Authors:  I P Hohenfeld; A A Wegener; M Engelhard
Journal:  FEBS Lett       Date:  1999-01-15       Impact factor: 4.124

8.  High Thermal Stability of Oligomeric Assemblies of Thermophilic Rhodopsin in a Lipid Environment.

Authors:  Tomomi Shionoya; Misao Mizuno; Takashi Tsukamoto; Kento Ikeda; Hayato Seki; Keiichi Kojima; Mikihiro Shibata; Izuru Kawamura; Yuki Sudo; Yasuhisa Mizutani
Journal:  J Phys Chem B       Date:  2018-06-27       Impact factor: 2.991

9.  Membrane matters: The impact of a nanodisc-bilayer or a detergent microenvironment on the properties of two eubacterial rhodopsins.

Authors:  Srividya Ganapathy; Laura Opdam; Yusaku Hontani; Sean Frehan; Que Chen; Klaas J Hellingwerf; Huub J M de Groot; John T M Kennis; Willem J de Grip
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-10-28       Impact factor: 3.747

10.  Rod visual pigment optimizes active state to achieve efficient G protein activation as compared with cone visual pigments.

Authors:  Keiichi Kojima; Yasushi Imamoto; Ryo Maeda; Takahiro Yamashita; Yoshinori Shichida
Journal:  J Biol Chem       Date:  2013-12-27       Impact factor: 5.157

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  5 in total

Review 1.  Rhodopsins: An Excitingly Versatile Protein Species for Research, Development and Creative Engineering.

Authors:  Willem J de Grip; Srividya Ganapathy
Journal:  Front Chem       Date:  2022-06-22       Impact factor: 5.545

2.  Expression of microbial rhodopsins in Escherichia coli and their extraction and purification using styrene-maleic acid copolymers.

Authors:  Keiichi Kojima; Yuki Sudo
Journal:  STAR Protoc       Date:  2021-12-16

Review 3.  Detergent-Free Isolation of Membrane Proteins and Strategies to Study Them in a Near-Native Membrane Environment.

Authors:  Bankala Krishnarjuna; Ayyalusamy Ramamoorthy
Journal:  Biomolecules       Date:  2022-08-04

Review 4.  Structures and Dynamics of Native-State Transmembrane Protein Targets and Bound Lipids.

Authors:  Michael Overduin; Catharine Trieber; R Scott Prosser; Louis-Philippe Picard; Joey G Sheff
Journal:  Membranes (Basel)       Date:  2021-06-17

5.  Nano-scale resolution of native retinal rod disk membranes reveals differences in lipid composition.

Authors:  Christopher L Sander; Avery E Sears; Antonio F M Pinto; Elliot H Choi; Shirin Kahremany; Fangyuan Gao; David Salom; Hui Jin; Els Pardon; Susie Suh; Zhiqian Dong; Jan Steyaert; Alan Saghatelian; Dorota Skowronska-Krawczyk; Philip D Kiser; Krzysztof Palczewski
Journal:  J Cell Biol       Date:  2021-06-16       Impact factor: 10.539

  5 in total

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