Literature DB >> 33067582

The importance of genomic variation for biodiversity, ecosystems and people.

Madlen Stange1, Rowan D H Barrett1, Andrew P Hendry2.   

Abstract

The 2019 United Nations Global assessment report on biodiversity and ecosystem services estimated that approximately 1 million species are at risk of extinction. This primarily human-driven loss of biodiversity has unprecedented negative consequences for ecosystems and people. Classic and emerging approaches in genetics and genomics have the potential to dramatically improve these outcomes. In particular, the study of interactions among genetic loci within and between species will play a critical role in understanding the adaptive potential of species and communities, and hence their direct and indirect effects on biodiversity, ecosystems and people. We explore these population and community genomic contexts in the hope of finding solutions for maintaining and improving ecosystem services and nature's contributions to people.

Entities:  

Year:  2020        PMID: 33067582     DOI: 10.1038/s41576-020-00288-7

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  102 in total

1.  Plant genotypic diversity predicts community structure and governs an ecosystem process.

Authors:  Gregory M Crutsinger; Michael D Collins; James A Fordyce; Zachariah Gompert; Chris C Nice; Nathan J Sanders
Journal:  Science       Date:  2006-08-18       Impact factor: 47.728

Review 2.  Marine biodiversity characteristics.

Authors:  Gilles Boeuf
Journal:  C R Biol       Date:  2011-04-30       Impact factor: 1.583

3.  The ecological importance of intraspecific variation.

Authors:  Simone Des Roches; David M Post; Nash E Turley; Joseph K Bailey; Andrew P Hendry; Michael T Kinnison; Jennifer A Schweitzer; Eric P Palkovacs
Journal:  Nat Ecol Evol       Date:  2017-12-04       Impact factor: 15.460

Review 4.  What genomic data can reveal about eco-evolutionary dynamics.

Authors:  Seth M Rudman; Matthew A Barbour; Katalin Csilléry; Phillip Gienapp; Frederic Guillaume; Nelson G Hairston; Andrew P Hendry; Jesse R Lasky; Marina Rafajlović; Katja Räsänen; Paul S Schmidt; Ole Seehausen; Nina O Therkildsen; Martin M Turcotte; Jonathan M Levine
Journal:  Nat Ecol Evol       Date:  2017-11-20       Impact factor: 15.460

Review 5.  The broad footprint of climate change from genes to biomes to people.

Authors:  Brett R Scheffers; Luc De Meester; Tom C L Bridge; Ary A Hoffmann; John M Pandolfi; Richard T Corlett; Stuart H M Butchart; Paul Pearce-Kelly; Kit M Kovacs; David Dudgeon; Michela Pacifici; Carlo Rondinini; Wendy B Foden; Tara G Martin; Camilo Mora; David Bickford; James E M Watson
Journal:  Science       Date:  2016-11-11       Impact factor: 47.728

6.  Contrasting genomic shifts underlie parallel phenotypic evolution in response to fishing.

Authors:  Nina O Therkildsen; Aryn P Wilder; David O Conover; Stephan B Munch; Hannes Baumann; Stephen R Palumbi
Journal:  Science       Date:  2019-08-02       Impact factor: 47.728

7.  Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds.

Authors:  William M Muir; Gane Ka-Shu Wong; Yong Zhang; Jun Wang; Martien A M Groenen; Richard P M A Crooijmans; Hendrik-Jan Megens; Huanmin Zhang; Ron Okimoto; Addie Vereijken; Annemieke Jungerius; Gerard A A Albers; Cindy Taylor Lawley; Mary E Delany; Sean MacEachern; Hans H Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-03       Impact factor: 11.205

Review 8.  Understanding and monitoring the consequences of human impacts on intraspecific variation.

Authors:  Makiko Mimura; Tetsukazu Yahara; Daniel P Faith; Ella Vázquez-Domínguez; Robert I Colautti; Hitoshi Araki; Firouzeh Javadi; Juan Núñez-Farfán; Akira S Mori; Shiliang Zhou; Peter M Hollingsworth; Linda E Neaves; Yuya Fukano; Gideon F Smith; Yo-Ichiro Sato; Hidenori Tachida; Andrew P Hendry
Journal:  Evol Appl       Date:  2016-11-22       Impact factor: 5.183

Review 9.  Estimated six per cent loss of genetic variation in wild populations since the industrial revolution.

Authors:  Deborah M Leigh; Andrew P Hendry; Ella Vázquez-Domínguez; Vicki L Friesen
Journal:  Evol Appl       Date:  2019-06-05       Impact factor: 5.183

10.  The global flood protection savings provided by coral reefs.

Authors:  Michael W Beck; Iñigo J Losada; Pelayo Menéndez; Borja G Reguero; Pedro Díaz-Simal; Felipe Fernández
Journal:  Nat Commun       Date:  2018-06-12       Impact factor: 14.919

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  12 in total

1.  Assessing ex situ genetic and ecogeographic conservation in a threatened but widespread oak after range-wide collecting effort.

Authors:  Bethany A Zumwalde; Bailie Fredlock; Emily Beckman Bruns; Drew Duckett; Ross A McCauley; Emma Suzuki Spence; Sean Hoban
Journal:  Evol Appl       Date:  2022-05-31       Impact factor: 4.929

2.  Effects of insularity on genetic diversity within and among natural populations.

Authors:  David A G A Hunt; Joseph D DiBattista; Andrew P Hendry
Journal:  Ecol Evol       Date:  2022-05-07       Impact factor: 3.167

3.  Variation in intraspecific demography drives localised concordance but species-wide discordance in response to past climatic change.

Authors:  Sean James Buckley; Chris J Brauer; Peter J Unmack; Michael P Hammer; Luciano B Beheregaray
Journal:  BMC Ecol Evol       Date:  2022-03-22

4.  Genetic Diversity on a Rare Terrestrial Orchid, Habenaria linearifolia in South Korea: Implications for Conservation Offered by Genome-Wide Single Nucleotide Polymorphisms.

Authors:  Soo-Rang Lee; Tae-Young Choi; Su-Young Jung
Journal:  Front Plant Sci       Date:  2022-02-24       Impact factor: 5.753

5.  AlleleShift: an R package to predict and visualize population-level changes in allele frequencies in response to climate change.

Authors:  Roeland Kindt
Journal:  PeerJ       Date:  2021-06-15       Impact factor: 2.984

6.  Charting a course for genetic diversity in the UN Decade of Ocean Science.

Authors:  Alex Innes Thomson; Frederick I Archer; Melinda A Coleman; Gonzalo Gajardo; William P Goodall-Copestake; Sean Hoban; Linda Laikre; Adam D Miller; David O'Brien; Sílvia Pérez-Espona; Gernot Segelbacher; Ester A Serrão; Kjersti Sjøtun; Michele S Stanley
Journal:  Evol Appl       Date:  2021-05-04       Impact factor: 5.183

7.  Why sequence all eukaryotes?

Authors:  Mark Blaxter; John M Archibald; Anna K Childers; Jonathan A Coddington; Keith A Crandall; Federica Di Palma; Richard Durbin; Scott V Edwards; Jennifer A M Graves; Kevin J Hackett; Neil Hall; Erich D Jarvis; Rebecca N Johnson; Elinor K Karlsson; W John Kress; Shigehiro Kuraku; Mara K N Lawniczak; Kerstin Lindblad-Toh; Jose V Lopez; Nancy A Moran; Gene E Robinson; Oliver A Ryder; Beth Shapiro; Pamela S Soltis; Tandy Warnow; Guojie Zhang; Harris A Lewin
Journal:  Proc Natl Acad Sci U S A       Date:  2022-01-25       Impact factor: 12.779

8.  Darwinian genomics and diversity in the tree of life.

Authors:  Taylorlyn Stephan; Shawn M Burgess; Hans Cheng; Charles G Danko; Clare A Gill; Erich D Jarvis; Klaus-Peter Koepfli; James E Koltes; Eric Lyons; Pamela Ronald; Oliver A Ryder; Lynn M Schriml; Pamela Soltis; Sue VandeWoude; Huaijun Zhou; Elaine A Ostrander; Elinor K Karlsson
Journal:  Proc Natl Acad Sci U S A       Date:  2022-01-25       Impact factor: 11.205

9.  Chromosome-Level Genome Assemblies Expand Capabilities of Genomics for Conservation Biology.

Authors:  Azamat Totikov; Andrey Tomarovsky; Dmitry Prokopov; Aliya Yakupova; Tatiana Bulyonkova; Lorena Derezanin; Dmitry Rasskazov; Walter W Wolfsberger; Klaus-Peter Koepfli; Taras K Oleksyk; Sergei Kliver
Journal:  Genes (Basel)       Date:  2021-08-28       Impact factor: 4.096

10.  Genomic and common garden approaches yield complementary results for quantifying environmental drivers of local adaptation in rubber rabbitbrush, a foundational Great Basin shrub.

Authors:  Trevor M Faske; Alison C Agneray; Joshua P Jahner; Lana M Sheta; Elizabeth A Leger; Thomas L Parchman
Journal:  Evol Appl       Date:  2021-11-27       Impact factor: 5.183

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