To characterize the thermosensitive coil-globule transition in atomistic detail, the conformational dynamics of linear polymer chains of acrylamide-based polymers have been investigated at multiple temperatures. Therefore, molecular dynamic simulations of 30mers of polyacrylamide (AAm), poly-N-methylacrylamide (NMAAm), poly-N-ethylacrylamide (NEAAm), and poly-N-isopropylacrylamide (NIPAAm) have been performed at temperatures ranging from 250 to 360 K for 2 μs. While two of the polymers are known to exhibit thermosensitivity (NEAAm, NIPAAm), no thermosensitivity is observed for AAm and NMAAm in aqueous solution. Our computer simulations consistently reproduce these properties. To understand the thermosensitivity of the respective polymers, the conformational ensembles at different temperatures have been separated according to the coil-globule transition. The coil and globule conformational ensembles were exhaustively analyzed in terms of hydrogen bonding with the solvent, the change of the solvent accessible surface, and enthalpic contributions. Surprisingly, independent of different thermosensitive properties of the four polymers, the surface affinity to water of coil conformations is higher than for globule conformations. Therefore, polymer-solvent interactions stabilize coil conformations at all temperatures. Nevertheless, the enthalpic contributions alone cannot explain the differences in thermosensitivity. This clearly implies that entropy is the distinctive factor for thermosensitivity. With increasing side chain length, the lifetime of the hydrogen bonds between the polymer surface and water is extended. Thus, we surmise that a longer side chain induces a larger entropic penalty due to immobilization of water molecules.
To characterize the thermosensitive coil-globule transition in atomistic detail, the conformational dynamics of linear polymer chains of acrylamide-based polymers have been investigated at multiple temperatures. Therefore, molecular dynamic simulations of 30mers of polyacrylamide (AAm), poly-N-methylacrylamide (NMAAm), poly-N-ethylacrylamide (NEAAm), and poly-N-isopropylacrylamide (NIPAAm) have been performed at temperatures ranging from 250 to 360 K for 2 μs. While two of the polymers are known to exhibit thermosensitivity (NEAAm, NIPAAm), no thermosensitivity is observed for AAm and NMAAm in aqueous solution. Our computer simulations consistently reproduce these properties. To understand the thermosensitivity of the respective polymers, the conformational ensembles at different temperatures have been separated according to the coil-globule transition. The coil and globule conformational ensembles were exhaustively analyzed in terms of hydrogen bonding with the solvent, the change of the solvent accessible surface, and enthalpic contributions. Surprisingly, independent of different thermosensitive properties of the four polymers, the surface affinity to water of coil conformations is higher than for globule conformations. Therefore, polymer-solvent interactions stabilize coil conformations at all temperatures. Nevertheless, the enthalpic contributions alone cannot explain the differences in thermosensitivity. This clearly implies that entropy is the distinctive factor for thermosensitivity. With increasing side chain length, the lifetime of the hydrogen bonds between the polymer surface and water is extended. Thus, we surmise that a longer side chain induces a larger entropic penalty due to immobilization of water molecules.
Since
their first discovery, thermosensitive polymers (TSPs) have been the
subject of interest in many different fields of research.[1−4] Next to medical applications, such as tissue engineering, bioseparation,
and drug delivery,[5−10] they have been proven to be highly valuable as programmable materials[11] and for gel actuators amongst other things.
Their development has advanced to the point that it is now possible
to use TSPs as a remote-controlled drug delivery platform in cancer
therapy.[12] Crucial for the majority of
the applications is the extraordinary phase behavior of these polymers.
Counterintuitively, depending on solvent conditions, TSPs undergo
a liquid–gel-phase transition with a lower critical solution
temperature (LCST). Thus, above the associated phase transition temperature,
TSPs form a viscoelastic gel, whereas below, they are found to be
in a liquid mixture with the solvent.[13]The above-mentioned macroscopic liquid-gel phase transition
of TSPs has been linked to a microscopic conformational rearrangement,
i.e., the coil–globule transition (CGT).[14−16] While the liquid–gel-phase
transition can be measured by clear changes in the properties of the
bulk fluid, such as the change of opacity, the conformational CGT
can be reproduced in experiments in dilute solution, without necessarily
exhibiting a phase transition of the liquid mixture.[15,17−20] Since detailed information about polymer conformations is extremely
challenging to be obtained experimentally, this transition is solely
defined by the change in the size distribution of the polymer chains
in solution. At “low temperatures”, i.e., below the
CGT temperature T < T*, TSPs
exist in extended conformations, indicated by a large radius of gyration
(Rg). However, at “high temperatures”, T > T*, the polymer chains collapse,
exhibiting a clearly lower distribution of Rg. Conventionally, the extended conformational state is called
coil (C), whereas the collapsed state is called globule (G).[13,21,22]Experimental studies have
been complemented by computational investigations to study the conformational
changes of polymers on an atomistic level. Molecular dynamic (MD)
simulations have been established as the state-of-the-art method.[23,24] Nevertheless, there are multiple reasons, why characterizing the
CGT is computationally challenging: One important aspect is that none
of the two conformational states, i.e., neither C nor G, are defined
by distinct structural descriptors. Consequently, the conformational
space is large in both conformational states, the C and the G subensembles.[25] Hence, the CGT is fundamentally different from
protein-folding processes in that respect.[26] The absence of a well-defined fold leads to an insuperable uncertainty
of whether the captured conformational subspace comprises the most
favorable conformational states, i.e., the lowest free energy minima.
Thus, both states can be very diverse conformationally. In fact, there
is experimental evidence for conformational substates within the G,
which can be separated kinetically.[27]Due to the slow timescale of the transition between C and G, it is
a challenge to achieve sufficient conformational sampling. Hence,
it is not trivial to assess how large the variance of thermodynamic
and structural properties within C and G may be. Furthermore, depending
on the simulation temperature, it is very challenging to sample a
large number of transitions. Therefore, reliable ensemble averages
can only be estimated from long simulations, in particular, at low
simulation temperatures.[28−30] The slow timescale of the conformational
transition translates to a large barrier in free energy, which can
often only be overcome by sophisticated advanced sampling methods.[31] Albeit often compared with protein folding/denaturation
processes, the conformational collapse of TSPs has often been studied
with comparably short simulation time.[32,33] We schematically
depict the CGT in Figure .
Figure 1
Schematic illustration of the coil–globule transition (CGT).
Exemplary structures of coil and globule conformations of NIPAAm are
shown.
Schematic illustration of the coil–globule transition (CGT).
Exemplary structures of coil and globule conformations of NIPAAm are
shown.To explain the thermosensitivity
of the CGT, the free energy of the process needs to be evaluated at
different temperatures.[31] Generally, the
free energy can be separated into enthalpic and entropic contributions.
Whereas the entropic contributions to the free energy can be a challenge
to obtain, the enthalpic contributions can be estimated by calculating
the internal energy difference between the two states, i.e., C and
G. To our knowledge, these contributions to the free energy of the
CGT have not been assessed in detail before. In this study, we aim
to systematically compare C and G conformations at different temperatures
with respect to their difference in enthalpy. Furthermore, we performed
a detailed analysis of the hydration of the C and G subensembles since
we expect the interactions with water to be of crucial importance
for the energy balance of the transition. Moreover, to facilitate
the understanding of the thermosensitive character of the transition,
we investigated a set of polymers, which are partly TSP and partly
non-TSP (see below).To compare the two conformational states,
i.e., C and G, at different temperatures, we separated the conformational
ensembles accordingly on the basis of established structural descriptors.
Since the C and G ensemble are defined by the size distribution of
the polymer chains in experiments, we calculate the radius of gyration
(Rg) and the hydrodynamic radius (Rh) of the conformational ensembles, which we
obtained from our simulations at different temperatures. Furthermore,
we calculated the solvent accessible surface area (σ), which
has been shown to be a useful additional indicator to distinguish
C and G.[31,34] In addition, we calculated the persistence
length of the polymers, as a measure for the general stiffness of
the polymer chains.[35,36]Furthermore, we rigorously
quantified the contributions to the enthalpy of the CGT process, which
originate from polymer–solvent, solvent–solvent, and
internal interactions of the polymer, respectively. Moreover, we calculated
the lifetimes of hydrogen bonds between the polymer and solvent. A
comparison of these lifetimes is useful to evaluate the hydration
entropy qualitatively. As already mentioned before, to obtain reasonable
estimates for the mean internal energies, sufficient sampling is crucial.
Therefore, we invested a significantly longer simulation time than
previous studies to minimize the bias introduced by arbitrarily chosen
starting structures.To better understand the onset of the thermosensitivity
of the CGT, we compared a set of chemically closely related polymers.
Despite their close relationship, they differ in their thermosensitive
behavior, one half being TSPs and the other half being non-TSPs. Comparing
more than one representative of both TSP and non-TSP opens up the
possibility to make more general statements about the differences
between these two classes of polymers. To interpret the results of
simulations of TSPs consistently, it is crucial to validate the force
field with non-TSPs also. Furthermore, examination of additional TSPs
next to NIPAAm, a prominent model system for the thermosensitive CGT,[22,37] is highly beneficial to determine the decisive mechanisms for the
thermosensitivity. To our knowledge, TSPs and non-TSPs have very rarely
been compared systematically before.[38]
Model Systems
We selected four acrylamide-based polymers
as model systems: besides poly-N-isopropylacrylamide
(NIPAAm), we simulated three additional closely related polymers.
We systematically decreased the length of the substituent at the nitrogen,
obtaining poly-N-ethylacrylamide (NEAAm), poly-N-methylacrylamid (NMAAm), and polyacrylamide (AAm). These
polymers are displayed in Figure . NEAAm and NIPAAm are known to undergo a thermosensitive
transition with a LCST of T* ≈ 347 K,[4,22] and T* ≈ 305 K,[1,18,21] respectively. AAm on the other hand is an
example for a non-TSP in watery solution.[39] NMAAm has been conjectured to exhibit an LCST above 373 K, in aqueous
solution.[4,22] To our knowledge, this assertion has hitherto
not been confirmed experimentally. Therefore, we expect it to be nonthermosensitive
in the investigated range of temperatures.
Figure 2
Set of closely related
acrylamide-based polymers. We introduce colors for easier identification
in figures below. From left to right: in blue, polyacrylamide (AAm);
in orange, poly-N-methylacrylamide (NMAAm); in green,
poly-N-ethylacrylamide (NEAAm); and in red, poly-N-isopropylacrylamide (NIPAAm).
Set of closely related
acrylamide-based polymers. We introduce colors for easier identification
in figures below. From left to right: in blue, polyacrylamide (AAm);
in orange, poly-N-methylacrylamide (NMAAm); in green,
poly-N-ethylacrylamide (NEAAm); and in red, poly-N-isopropylacrylamide (NIPAAm).Generally, the existence of the CGT and the actual transition temperature
of linear polymer chains also depend on the chain length.[40−42] We chose to simulate polymer chains with 30 monomer units since
the 30mer is a well-established model system for the CGT of NIPAAm.[41,43,44]
Computational
Methods
Simulation Setup
As starting structures
for the MD simulations, we prepared extended conformations of syntactic
30mers of AAm, NMAAm, NEAAm, and NIPAAm, making use of the Maestro
software package.[45] We solvated these structures
in cubic boxes with a side length of 8 nm with SPC/E water.[46,47] Prior to the MD simulations, we minimized the initial configurations
using the steepest descent method. Before the production runs, we
equilibrated the system in short NVT simulations. Except for the preparation
of the initial polymer configuration, we used the GROMACS MD-simulation
software package.[48] For all simulations,
we used the OPLS2005 force field,[49,50] which has
been established for simulations of NIPAAm in previous publications.[31,43,44,51−53] We show force-field parameters in the Supporting Information. In our production runs,
we applied the Parinello–Rahman barostat,[54,55] with a reference pressure of 1 bar and the velocity-rescaling thermostat[56] at respective simulation temperatures ranging
from 250 to 360 K. We used the LINCS algorithm to constrain the bonds
involving hydrogen atoms and used a timestep of 2 fs for our MD integration.[57,58] All production runs were performed with a simulation length of 2
μs. Throughout all simulations, we applied periodic boundary
conditions and used the particle mesh Ewald method for treating long-range
electrostatic interactions.[59]
Conformational Analysis
We calculated the radius of
gyration (Rg) and the solvent accessible
surface area (σ) of conformations sampled every 20 ps in our
trajectory. For these analyses, we used the GROMACS tools.[60,61] Following our previously published approach, we defined the conformational
subensembles of C and G in the joint Rg-σ plane.[31] Thus, we separated populations
in the two-dimensional histograms in this space. We verified this
conformational distinction by visual inspection of the structures.
Furthermore, we validated the ratio of the mean Rg within both subensembles. This method led to a temperature-independent
conformational criterion for every polymer to identify C or G, respectively.
Therewith, we were able to separate C and G conformations at all applicable
temperatures, which facilitated the systematic comparison of these
two conformational states.As an additional metric for the dimensions
of the polymers, we calculated the hydrodynamic radius (Rh) of snapshots along our trajectory. Therefore, we used
HYDROpro software to process conformations, which we sampled every
10 ns.[62] By calculating the ratio of Rg over Rh,we were able to evaluate
the compactness of the conformations of the polymer chains. Typically,
we find ρ ≈ 0.7 for globular structures, whereas ρ
> 1 for extended conformations, i.e., the C.[63−66]Furthermore, to quantify
the polymer stiffness, we calculated the persistence length. An introduction
into the methodology, as well as all related results and discussion,
can be found in the Supporting Information.
Hydration Analysis
To quantify polymer–polymer
and polymer–water interactions, we performed a detailed analysis
of hydrogen bonds. Therefore, we considered oxygen atoms of the polymer
to be hydrogen bond acceptors and nitrogen atoms of the polymers and
oxygen atoms of water molecules to be able to accept and donate hydrogen
bonds. We applied a combined criterion for hydrogen bonds: first,
donor and acceptor atoms need to be 3.5 Å or closer, and second,
the angle between the atoms of hydrogen-donor–acceptor needs
to be 30° or smaller. We separately counted the hydrogens between
the following pairs of sets of atoms: polymer–polymer, polymer–water,
polymeroxygen–water, and polymernitrogen–water. To
compare the polymers with respect to their interaction with water,
we calculated the mean number of hydrogen bonds between the polymers
and water (ν). For this analysis, we separated the structural
subensembles of C and G (see above) and calculated the mean within
these subensembles for all polymers at every applicable temperature.
As a measure for the affinity of the surface of the polymers to water,
we calculated the number of hydrogen bonds per solvent accessible
surface area νσ = ν/σ. Likewise,
we calculated these quantities for C and G separately.Furthermore,
we estimated the lifetime of the hydrogen bonds of the polymers with
water from the autocorrelation of the existence function of the hydrogen
bonds.[67] Therefore, we separately analyzed
the hydrogen bonds with the nitrogen of the polymer and the oxygen
of the polymer and water at different temperatures. To judge the lifetimes
of the hydrogen bonds at different temperatures, we performed analogous
analyses of pure water simulations and used the lifetime of the hydrogen
bonds between water molecules in bulk water at different temperatures
as reference.
Thermodynamic Analysis
To quantify the enthalpy of the CGT at different temperatures,
we separately calculated the following contributionswhere ΔCGHSol is the difference in the enthalpy
of solvent–solvent interactions, ΔCGHPol is the difference in enthalpy of the polymer,
and ΔCGHPol – Sol is the difference in enthalpy of polymer–solvent interactions.
All these differences ΔCG are calculated as mean
changes with the conformational transition, at the respective temperature.
Under the assumption that no work is done (ΔCGV = 0), we estimate the enthalpy of the CGT by the internal
energy. Therefore, we calculated the enthalpy of conformations as
the sum of the nonbonded potential energy terms of the respective
groups, i.e., Lennard–Jones and electrostatic potentials. These
potential energies have been obtained with the energy-group feature
of the rerun functionality of GROMACS. In the framework of this analysis,
we also took the change in the potential energy of the torsional degrees
of freedom of the polymer into account. Since we ascertained that
the contribution of this term to the enthalpy difference is two magnitudes
smaller than the other contributions, we neglected it in the following.Since the solvent accessible surface area decreases with the CGT,
the number of water molecules bound to G is expected to be smaller
than for C. Therefore, the number of polymer–solvent interactions
is expected to decrease, with the collapse of the polymer chain. At
the same time, the number of solvent–solvent interactions is
expected to increase. Furthermore, the number of polymer–polymer
interactions is expected to increase with the CGT. Assuming the number
of interaction sites of solvent and polymers to be conserved, we reason
that for every two water molecules, which unbind from the polymer,
a water–water and a polymer–polymer bond are formed.
Furthermore, assuming all bonds to be energetically equivalent (solvent–solvent,
polymer–solvent, and polymer–polymer), in a crude approximationfollows. Thus, after a small rearrangement we obtainThese assumptions may be very inaccurate for other compounds,
depending on the affinity of the accessible chemical groups to water.
We will test the validity of these assumptions based on our simulation
data.
Results
Conformational Analysis
and Thermosensitivity
To facilitate the comparison of C and
G, we separated our conformational ensembles at different temperatures
accordingly. Therefore, we projected all sampled polymer conformations
onto the Rg-σ plane for each polymer
species (see Figure S5). Since we aimed
to achieve a temperature-independent classification, we used the conformations
from simulations at all temperatures to make our state definition.
In these two-dimensional histograms, we separated the conformational
subensembles C and G for every polymer in the series. We note that
this separation becomes less distinct with decreasing side chain length.
In particular, for the polymers, which do not exhibit a thermosensitive
CGT, i.e., AAm and NMAAm, the C ensemble is less pronounced. For comparison,
the criteria for the state definition are shown in Figure S6. Furthermore, we show the defined state borders
for every polymer and the mean properties within the C and G subensembles
in Figures S7 and S8, respectively. There,
we can observe that the state borders follow a consistent trend and
that Rg(coil) over Rg(globule) is between 1.2 and 1.4 for all polymers. Additionally,
we note that the latter relation appears to be systematically lower
for non-TSP than for TSP.With this state definition, we identified
the predominant conformational state in the simulations at different
temperatures. In Figure , we show the mean conformational state at different temperatures
for every polymer. Here, the eventual temperature sensitivity is visible.
It is apparent that only NEAAm and NIPAAm show a thermosensitive transition.
From the turning point of the logistic fit of the mean state, we obtain
an estimate for the CGT temperature. According to these fits, we report T* = 281 K for NEAAm and T* = 272 K for
NIPAAm, respectively. We show the underlying timeseries of Rg, σ, and the conformational state we
derived from these two quantities, for all temperatures and all polymers
in Figures S1–S4.
Figure 3
Mean conformational state
at different simulation temperatures (T), calculated
with the state definition in two-dimensional Rg-σ histograms (Figure S5).
Here, we show the arithmetic mean of the assigned states over all
frames in our 2 μs simulations. The error bars represent the
standard error of the mean. From top to bottom, in respective colors
and symbols: in blue triangles, we show data points from simulations
of AAm; in orange squares, NMAAm; in green diamonds, NEAAm; and in
red crosses, NIPAAm. Where applicable, we show a logistic fit of the
data and depict the turning point of the curve with a dashed line,
which gives an estimate for the CGT temperature (T*).
Mean conformational state
at different simulation temperatures (T), calculated
with the state definition in two-dimensional Rg-σ histograms (Figure S5).
Here, we show the arithmetic mean of the assigned states over all
frames in our 2 μs simulations. The error bars represent the
standard error of the mean. From top to bottom, in respective colors
and symbols: in blue triangles, we show data points from simulations
of AAm; in orange squares, NMAAm; in green diamonds, NEAAm; and in
red crosses, NIPAAm. Where applicable, we show a logistic fit of the
data and depict the turning point of the curve with a dashed line,
which gives an estimate for the CGT temperature (T*).To validate the definition of
conformational states, we evaluated the compactness of the polymer
conformations. Therefore, we characterized the polymers’ ratio
of radius of gyration over hydrodynamic radius, ρ = Rg / Rh, Figure S9. There, we can generally not only judge
the conformational change with the temperature but also note that
ρ spreads around 0.7 ± 0.05 for the collapsed conformations
of all polymers in our set.In Figure S12, we show the mean number of internal hydrogen bonds at different
temperatures for the series of polymers. We observed consistent trends
as for the state definition with other structural descriptors. Generally,
hardly any internal hydrogen bonds exist in the C. These internal
hydrogen bonds are formed when the polymer chains collapse, which
is in line with the picture of the CGT outlined in earlier sections.
The number of internal hydrogen bonds in the G state is higher for
AAm than for the other polymers due to the primary amide function.
This major difference between AAm and the other polymers influences
basically all other analyses.
Hydration
and Enthalpic Differences of Coils and Globules
Above, we
visualize the hydrogen bonds between the polymers and water at different
temperatures. We show the number of hydrogen bonds (ν) in Figure and the number of
hydrogen bonds per solvent accessible surface area (νσ) in Figure , respectively.
At every temperature, we analyze the C and G subensembles separately.
We note that the C exhibits consistently higher ν but a lower
νσ than the G. This holds true for every polymer
at all temperatures. We note that νσ is smaller
for the TSPs in our set, namely, NIPAAm and NEAAm, than for the non-TSPs.
As a trend, νσ increases with decreasing sidechain
length. Furthermore, AAm generally exhibits higher ν than the
other polymers in the set, hence also much higher νσ. This is due to the fact that the primary amine can form two hydrogen
bonds (as already mentioned before). Except for AAm, ν is very
similar within the set. In Figure S14,
we show the naïve mean over the whole trajectories, without
separation of the subensembles, which is generally less straightforward
to interpret. This is due to the fact that the naïve
mean represents a weighted average of C and G for which the weights
change with temperature.
Figure 4
Number of hydrogen bonds (ν) between polymers
and water. We show data related to the respective polymers as follows:
(a) AAm, (b) NMAAm, (c) NEAAm, and (d) NIPAAm. We calculated the mean
and standard deviation of these quantities within the C (purple spheres)
and the G (dark red diamonds), respectively, and performed a linear
fit for these points. The opacity of the symbols represents the state
predominantly existing at a given temperature. In addition, we plot
small dots to make it easier to identify the position of the highly
transparent points.
Figure 5
Number of hydrogen bonds
between polymers and water per solvent accessible surface area (νσ). We show data related to these respective polymers
as follows: (a) AAm, (b) NMAAm, (c) NEAAm, and (d) NIPAAm. We calculate
the mean and standard deviation of these quantities within the C (purple
spheres) and the G (dark red diamonds), respectively, and perform
a linear fit for these points. The opacity of the symbols represents
the state predominantly existing at a given temperature. In addition,
we plot small dots to make it easier to identify the position of the
highly transparent points. Please note the different y-axis scale for AAm.
Number of hydrogen bonds (ν) between polymers
and water. We show data related to the respective polymers as follows:
(a) AAm, (b) NMAAm, (c) NEAAm, and (d) NIPAAm. We calculated the mean
and standard deviation of these quantities within the C (purple spheres)
and the G (dark red diamonds), respectively, and performed a linear
fit for these points. The opacity of the symbols represents the state
predominantly existing at a given temperature. In addition, we plot
small dots to make it easier to identify the position of the highly
transparent points.Number of hydrogen bonds
between polymers and water per solvent accessible surface area (νσ). We show data related to these respective polymers
as follows: (a) AAm, (b) NMAAm, (c) NEAAm, and (d) NIPAAm. We calculate
the mean and standard deviation of these quantities within the C (purple
spheres) and the G (dark red diamonds), respectively, and perform
a linear fit for these points. The opacity of the symbols represents
the state predominantly existing at a given temperature. In addition,
we plot small dots to make it easier to identify the position of the
highly transparent points. Please note the different y-axis scale for AAm.In Figure S15, we show the mean number of hydrogen bonds between
water and nitrogen or oxygen of the polymers, respectively. There,
we observe no significant difference between the number of hydrogen
bonds at the nitrogen and oxygen of the polymer with respect to the
comparison of the C and G. This observation holds true for almost
all polymers at all temperatures, with AAm being the exception (see
above).To compare the enthalpic contributions with the CGT
in accordance with eq , we plotted the enthalpy difference of the polymer ΔCGHPol against the enthalpy difference
of the water–water interactions ΔCGHSol, Figure . There, we generally notice that the data scatters
around the diagonal,
Figure 6
Comparison of enthalpic contributions to the free energy
of the CGT. ΔCGHPol is
the difference in internal energy of the polymer; ΔCGHSol is the difference in internal energy
of the water–water interactions. We show data related to the
respective polymers as follows: (a) AAm, (b) NMAAm, (c) NEAAm, and
(d) NIPAAm. In all panels, we plot the mean difference of these two
quantities at different temperatures. The corresponding simulation
temperature is color coded in accordance with the color bar. To facilitate
the comparison of the magnitude of these two properties, we plot x = y as a dashed grey line.
Comparison of enthalpic contributions to the free energy
of the CGT. ΔCGHPol is
the difference in internal energy of the polymer; ΔCGHSol is the difference in internal energy
of the water–water interactions. We show data related to the
respective polymers as follows: (a) AAm, (b) NMAAm, (c) NEAAm, and
(d) NIPAAm. In all panels, we plot the mean difference of these two
quantities at different temperatures. The corresponding simulation
temperature is color coded in accordance with the color bar. To facilitate
the comparison of the magnitude of these two properties, we plot x = y as a dashed grey line.x = y. From that, we conclude that the approximation ΔCGHSol ≈ ΔCGHPol is valid within a certain variance (eq ). Thus, both these quantities
are of very similar magnitude at all temperatures for all polymers.
Taking a closer look, we note that the shorter the sidechain, the
more the trendline is shifted in the positive direction (linear fit
in green in the respective panels). Accordingly, as a trend, ΔCGHSol > ΔCGHPol for these polymers. Generally, since
both ΔCGHPol and ΔCGHSol are negative, the G is favored
at all temperatures for all polymers in respect to these quantities.
Once more, both these quantities are lower for AAm in comparison to
the other polymers because it can form an additional hydrogen bond
per monomer unit (see above).In Figure , we compare ΔCGHPol – Sol with the sum ΔCGHPol + ΔCGHSol. Here, we can see that
Figure 7
Comparison of the enthalpic
contributions to the free energy of the CGT. ΔCGHPol is the difference in internal energy of
the polymer, ΔCGHSol is
the difference in internal energy of the water–water interactions,
and ΔCGHPol – Sol is the difference in internal energy of the polymer–water
interactions. We show data related to the respective polymers as follows:
(a) AAm, (b) NMAAm, (c) NEAAm, and (d) NIPAAm. In all panels, we plot
the sum, ΔCGHPol + ΔCGHSol vs ΔCGHPol – Sol at different temperatures.
The corresponding simulation temperature is color coded in accordance
with the color bar. To facilitate the comparison of the magnitude
of the two axes, we plot y = −x as a dashed grey line within the respective panels. Furthermore,
we mark the area where x + y >
0 in grey. In this region, the total enthalpy of the transition (ΔCGHTot = ΔCGHSol + ΔCGHPol + ΔCGHPol – Sol) would be unfavorable. In addition, we plot a linear fit of the
data with the function: y = −x + b in green.
Comparison of the enthalpic
contributions to the free energy of the CGT. ΔCGHPol is the difference in internal energy of
the polymer, ΔCGHSol is
the difference in internal energy of the water–water interactions,
and ΔCGHPol – Sol is the difference in internal energy of the polymer–water
interactions. We show data related to the respective polymers as follows:
(a) AAm, (b) NMAAm, (c) NEAAm, and (d) NIPAAm. In all panels, we plot
the sum, ΔCGHPol + ΔCGHSol vs ΔCGHPol – Sol at different temperatures.
The corresponding simulation temperature is color coded in accordance
with the color bar. To facilitate the comparison of the magnitude
of the two axes, we plot y = −x as a dashed grey line within the respective panels. Furthermore,
we mark the area where x + y >
0 in grey. In this region, the total enthalpy of the transition (ΔCGHTot = ΔCGHSol + ΔCGHPol + ΔCGHPol – Sol) would be unfavorable. In addition, we plot a linear fit of the
data with the function: y = −x + b in green.ΔCGHPol – Sol > 0 for all polymers at all temperatures. Therefore, the enthalpy
of the polymer–solvent interactions generally disfavors the
CGT, which agrees with the expectation. In accordance with eq , we plot the linear function y = – x in a dashed grey line, as
an orientation. In addition, we fitthe data of all polymers
with the linear function y = – x + b. The resulting fits confirm thatΔCGHPol + ΔCGHSol ≈ – ΔCGHPol – Sol is generally a valid
approximation (eq ).
We note that the shorter the sidechain, the further is the trendline
shifted in negative direction. We show the differences in ΔCGHTot in Figure S18. There, we can see that the mean ΔCGHTot shows a clear trend to be higher for longer
sidechains. While on average ΔCGHTot > 0 for NIPAAm, for AAm, almost all values are
below 0.Furthermore, we compared ΔCGHPol and ΔCGHSol with −ΔCGHPol – Sol/2 in Figures S16 and S17, respectively. According to eq , these three quantities are expected to be
approximately equal. In Figure S16, we
can ascertain that as a trend ΔCGHSol and −ΔCGHPol – Sol/2 are indeed approximately
equal for all polymers, whereas the shorter the sidechain, the systematically
lower is ΔCGHPol in comparsion
to −ΔCGHPol – Sol/2.In Figure , we depict the mean lifetimes of hydrogen bonds between the polymers
and water. We display the ratio of the lifetimes of hydrogen bonds
between polymer and water (⟨τPol – Sol ⟩) over the lifetimes of hydrogen bonds in bulk water at
the same temperature (⟨τSol – Sol ⟩). The lifetimes of the hydrogen bonds with oxygen and nitrogen
are displayed in separate panels. Generally, ⟨τPol – Sol ⟩ is longer with increasing sidechain length. This trend
is more prominent for hydrogen bonds involving the polymer’s
oxygen atoms of the amide groups than for the hydrogen bonds at the
nitrogen atoms. Nevertheless, the trend is also visible there. We
note that at low temperatures, ⟨τPol – Sol ⟩ is significantly longer than ⟨τSol – Sol ⟩, for both nitrogen and oxygen. Moreover, the higher the
temperature, the smaller is the ratio of ⟨τPol – Sol ⟩ and ⟨τSol – Sol ⟩. In Figure S19, we show the
unscaled values of ⟨τPol – Sol ⟩, and as a reference, we show ⟨τSol – Sol ⟩ in bulk solvent in Figure S20.
Figure 8
Mean lifetimes of hydrogen bonds between the solvent and amide group
of the different polymers (⟨τPol – Sol ⟩) at different temperatures. Scaled by the mean lifetime
of hydrogen bonds in bulk water at the same temperature (⟨τSol – Sol ⟩). In the upper panel, we
show the lifetimes between the solvent and nitrogen atoms of the polymers,
and in the lower panel, we show the lifetimes between the solvent
and oxygen atoms of the polymers. In blue triangles, we show data
points from simulations of AAm; in orange squares, NMAAm; in green
diamonds, NEAAm; and in red crosses, NIPAAm. We show a logistic fit
of the data in the respective color.
Mean lifetimes of hydrogen bonds between the solvent and amide group
of the different polymers (⟨τPol – Sol ⟩) at different temperatures. Scaled by the mean lifetime
of hydrogen bonds in bulk water at the same temperature (⟨τSol – Sol ⟩). In the upper panel, we
show the lifetimes between the solvent and nitrogen atoms of the polymers,
and in the lower panel, we show the lifetimes between the solvent
and oxygen atoms of the polymers. In blue triangles, we show data
points from simulations of AAm; in orange squares, NMAAm; in green
diamonds, NEAAm; and in red crosses, NIPAAm. We show a logistic fit
of the data in the respective color.
Discussion
Conformational States and
Thermosensitivity
Our estimates of the CGT temperatures are
in excellent qualitative agreement with experimental references, i.e.,
they reproduce the existence and ordering of CGT temperatures within
the set of polymers. In experiments, the CGT temperatures of NIPAAm
and NEAAm have been determined as approximately 305[1,18,21] and 347 K,[4,22] respectively.
We estimate these CGT temperatures to be 272 and 281 K, respectively.
Therefore, despite being qualitatively correct, the obtained transition
temperatures are systematically lower than the experimentally obtained
values. We believe that this shift originates from small inaccuracies
of the force field and water model (see below). However, our estimate
for the CGT temperature of NIPAAm is in perfect agreement with prior
computational publications. Generally, this temperature has been estimated
to lie within 270–280 K with this combination of the force
field and water model.[31,52] Hence, considering our superior
sampling efforts combined with our improved temperature resolution,
we are confident to estimate the CGT temperature with higher accuracy
than before.For the first time, a set of closely related polymers
has been simulated for such a long simulation time, i.e., 2 μs,
at different temperatures. Due to the high barrier between C and G,
the expected timescales of the transition are generally long.[31] In Figure S4, we
show the timeseries of Rg, σ, and
the resulting conformational state of NIPAAm at different temperatures.
There, we can assess that, at 270 K, the first transition to a stable
globule only occurs after almost 1 μs. The accuracy of MD-based
predictions inherently relies on the extent of the captured conformational
ensemble. Insufficient sampling may provide unphysical state populations,
which inevitably result in erroneous predictions and unreliable observations.
Therefore, simulations of only a few 100 ns may not be enough to determine
the preferred conformational state at low temperatures. Nevertheless,
we are aware that also 2 μs of simulation time will most likely
not suffice to obtain convergence in all degrees of freedom. However,
we do observe back and forth transitions between the conformational
subensembles. This indicates, that we, in fact, sample close-to-equilibrium
distributions and not only kinetically trapped conformations.We further report that the previously published method for separating
C and G in the Rg-σ plane is applicable to other
polymers besides NIPAAm. Despite this method being increasingly challenging
with less pronounced populated C states, we were able to define distinct
state borders, leading to thoroughly consistent results in all aspects.
As an additional verification, we evaluated the ratio of the mean Rg(coil) over Rg(globule),
which agrees with the expected values and published size distributions
for NIPAAm 30mers.[68] Furthermore, having
analyzed the ratio of Rg over Rh, i.e., ρ, we can consistently confirm
the globularity of the structures at the respective temperatures.
In summary, we are confident in the validity of the separation of
the conformational subensembles. This method enabled us to systematically
compare C and G at different temperatures.Based on
the aforementioned state separation, we characterized the hydration
of the C and G subensembles of the polymers at different temperatures.
Therefore, we profiled the interaction of each polymer with the surrounding
water molecules. We report that our results for ν are not only
well in line, with similar computational studies on NIPAAm,[69] but also qualitatively agree with experimental
measurements of the hydration number of NIPAAm.[70,71] Comparing ν and νσ, we notice that
the comparison between C and G gives qualitatively consistent results
for all polymers in our set at all temperatures, no matter whether
thermosensitive or not. Generally, ν is higher in C than in
G. This is due to the fact that the polymer forms internal hydrogen
bonds with the structural collapse. In contrast, νσ is generally lower in C than in G. Thus, the general affinity to
water of the surface changes. In addition, the volume of the solvation
shell, therefore, the number of nonbulk waters, decreases with the
conformational transition to the G. Furthermore, we find that νσ systematically decreases with increasing sidechain
length. Generally, these results go in line, with the quantification
of the enthalpic contributions of the CGT.We were able to confirm
our initial assumptions: On the one hand ΔCGHSol ≈ ΔCGHPol (eq ) and on the other hand ΔCGHSol + ΔCGHPol ≈
– ΔCGHPol – Sol (eq ). Since these
equations are approximately true, we reason that the general picture
of the release of water molecules from the solvation shell to bulk
water, with polymer bonds forming is valid. Nevertheless, we noticed
systematic deviations from these approximations. Comparing the values
for ΔCGHtot of the different
polymers, we find the following trend: With increasing sidechain length,
on average the globule becomes less favored. Furthermore, according
to our results, the G is not generally enthalpically favored. Additionally,
the enthalpy of the CGT is dominated by ΔCGHPol – Sol, which is generally
large in magnitude and positive thus unfavorable. As a trend, with
decreasing size of the substituent ΔCGHSol is more positive than ΔCGHPol. Under the assumption that the number of
binding sites, of both solvent and polymer molecules, is conserved,
we infer that the potential energy per bond varies. Furthermore, we
found that ΔCGHPol is
systematically shifted in comparison to −ΔCGHPol – Sol/2. In contrast
to that ΔCGHSol ≈
– ΔCGHPol – Sol/2, for all polymers. Therefore, we assume that solvent–solvent
bonds and polymer–solvent bonds are approximately equivalent
in potential energy for all polymers. However, the shorter the sidechain,
the more favorable are polymer–polymer interactions in comparison
to polymer–solvent interactions.In summary, in terms
of the potential energy, both polymer–polymer and solvent–solvent
interactions favor the CGT. In contrast, the polymer–solvent
interactions, which dominate the enthalpy, disfavor the CGT. Furthermore,
the longer the sidechain, the weaker are the polymer–polymer
interactions in comparison to the polymer–solvent interactions.
Therefore, with increasing sidechain, the globule is in sum enthalpically
less favorable. We assume electrostatic interactions to be of major
importance for the potential energy. Therefore, deficiencies in the
determination of the partial charges of the polymers may affect the
energetic balance of the CGT. This may lead to shifted thermosensitive
behavior, as already reported by the referenced studies.[72,73] We furthermore believe, that the strength of the polymer–polymer
and polymer–solvent bonds may be influenced by sterical hindrance,
i.e., binding partners with high affinity may not get into close contact
for geometrical reasons. This would not be contradicted by the known
effect of the tacticity on the thermosensitivity.Lastly, we
evaluated the lifetime of hydrogen bonds between the polymers and
solvent. Generally, ⟨τPol – Sol ⟩ is longer than ⟨τSol – Sol ⟩ for all polymers in our set at every temperature we simulated.
With increasing temperature, the ratio of ⟨τPol – Sol ⟩ over ⟨τSol – Sol ⟩ decreases. Furthermore, we note that this ratio is systematically
higher with longer sidechains. From significantly longer lifetimes
of hydrogen bonds, we reason an increased immobility of water molecules
at the surface of the polymers, which is consistent with recently
published experimental results.[74] We hypothesize
that the trend of increasing ⟨τPol – Sol ⟩ with increasing sidechain is partly due to steric hindrance
of water molecules, which intercalate between neighboring oxygen and
nitrogen atoms. Therefore, we expect the sterical barrier for water
molecules in the solvation shell to diffuse to the bulk to grow with
the increasing size of the group at the nitrogen. Moreover, we hypothesize
that large rearrangements in the solvation shell are necessary for
the CGT to occur, which agrees with recent studies.[53,75] Therefore, the deceleration of the water dynamics at low temperatures
significantly increases transition times.Furthermore, we believe
that the immobilization of water molecules in the solvation shell
translates into an entropic penalty in comparison to bulk water. Therefore,
as it has been stated before in literature, we expect the thermosensitivity
to originate from an entropic effect.[76,77] With increasing
temperature, the effect of this penalty on the free energy increases.
Furthermore, the larger the solvation shell volume, the larger the
impact of this penalty. This hypothesis is well in line with recently
published experimental data[74,76] and computational studies.[78,79] Furthermore, this theory is not contradicted by the fact that the
CGT temperature shifts in water–alcohol mixtures or in deuteratedwater.[76,80,81] Accordingly,
we expect the water model in simulations to be of great importance
for the balance of the CGT.[76] Hence, we
surmise that the temperature shift for the CGT temperature may find
its origin in the interplay between deficiencies of the water model
and inaccuracies in the force field. According to our results, a purely
enthalpic contemplation of the energetic balance of this transition
cannot fully explain the thermosensitivity of the process.
Conclusions
The separation of the conformational ensembles
at different temperatures enabled us to make some general statements
about the hydration of C and G. Comparing the number of hydrogen bonds
per solvent accessible surface area (νσ) for
TSPs and non-TSPs, we can identify clear distinctions. We conclude
that not only the affinity of the polymers’ surface to water
but also the decrease in the solvation shell volume with the collapse
of the chain play an important role in the stabilization of C. We
want to emphasize that the differences in hydration between C and
G can be identified at temperatures above and below the CGT temperature.
Therefore, merely describing the hydration of the conformations, without
making considerations about the effect on the free energy of the whole
system (including solvent), may not lead to an exhaustive explanation
of the thermosensitivity.We want to emphasize that the non-TSPs
in our set collapse at every simulated temperature, whereas the TSPs
do not collapse below the transition temperature.
Therefore, to explain the thermosensitivity, it is important to understand
what stabilizes the C at lower temperatures, rather than what drives
the collapse at higher temperatures. Furthermore, we report that it
is not sufficient to simulate only a few hundred nanoseconds (or even
less), especially at low temperatures, since the timescales of the
transition are of a similar magnitude. Depending on the starting structure,
the simulation results may be largely biased if the simulation time
is too short.According to our results, the G is not generally
enthalpically favored. We found that with increasing size of the substituent
at the nitrogen, the polymer–polymer interactions with forming
the G become weaker in comparison to the polymer–water interactions.
This leads to the G being enthalpically less favored with longer sidechains.
Furthermore, we ascertained the lifetimes of the hydrogen bonds between
polymer and water to be generally longer than in bulk water. In addition,
we note that these lifetimes are systematically higher in TSPs than
in non-TSPs. Therefore, we hypothesize that the higher affinity of
water to the surface of C leads to an entropic penalty for the systems
due to tightly bound waters. As a result, at higher temperatures,
the C will not be stabilized by the surrounding solvent anymore.In conclusion, we believe that the thermosensitive CGT can only be
fully explained with a detailed consideration of the entropic contributions
to the free energy of this transition. We believe that the entropy
of the solvation is a crucial quantity for the free-energy balance
of the CGT. We aim at quantifying this property in future publications.
Authors: Sanket A Deshmukh; Subramanian K R S Sankaranarayanan; Kamlesh Suthar; Derrick C Mancini Journal: J Phys Chem B Date: 2012-02-27 Impact factor: 2.991